Glyma20g14660 - SoyBase

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Report for Sequence Feature Glyma20g14660

Feature Type:	gene_model
Chromosome:	Gm20
Start:	19844594
stop:	19852186
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma20g14660

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G31340	AT	Annotation by Michelle Graham. TAIR10: embryo defective 1381 \| chr2:13361614-13364633 FORWARD LENGTH=559	SoyBase	E_val: 4.00E-93	ISS
GO:0009793	GO-bp	Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy	SoyBase	N/A	ISS
GO:0005739	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
UniRef100_D7LD19	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: EMB1381 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LD19_ARALL	SoyBase	E_val: 1.00E-91	ISS
UniRef100_I1NE85	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1NE85_SOYBN	SoyBase	E_val: 1.00E-158	ISS

Expression Patterns of Glyma20g14660

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma20g14660 not represented in the dataset	Glyma20g14660 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma20g14660 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.20g058300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma20g14660

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma20g14660

Limit To All Plant Sequences

>Glyma20g14660.1   sequence type=CDS   gene model=Glyma20g14660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CAGACATTTGGATGGACTCCACAAGAAGCCAAAATGCATTTGGTCACTGACTATTTTAGTCATTCAGAATGGAAAGTGATTGCTGAGGTACTTGGGCCAAACCCTCGACATCTATTTGAACTTTATGCACTTAAACAAAGCAATTATTACCAGAAAAAGCAAGAGCAAGATGGATCAAAGAAGGGGACTATTACTGTTGTGAACCCTGCTTTGGATGAAGCATTGGAGATCTTGCAAAAATTTGCAGTTGATGTATACAATGGAAAGGTTTCAGAAGACAGATTACGTTTTGGTGCACCATGGAGGCATCCGCCACAAATTGACGACCCTAAGTTGCGCATGGAATGGGCAAAACTTCAGTTAATGGATTTTGTTCAGTCTTTGGCCAATACAGAATTTGGGGTCAATTACCGAATTGATTATAGTGAAGAAATCTTTGATGATCCATCCACTTTTGCATTGTTACAGGTGGGTTTGCTTTATGCTCAACGGGATCCACCATTCCTTCGTCCCATATCTAAGGGGATACAGAGGTGTCTAGTGAGATGGCTTGCACAGCAGTGGATGCAGCTGAATTTTCACAACTGGATTCATTTTGTGTGGCACAGAATGATACGCGGACGCTATTATCGCCATTTGATG

Predicted protein sequences of Glyma20g14660

Limit To All Plant Sequences

>Glyma20g14660.1   sequence type=predicted peptide   gene model=Glyma20g14660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
QTFGWTPQEAKMHLVTDYFSHSEWKVIAEVLGPNPRHLFELYALKQSNYYQKKQEQDGSKKGTITVVNPALDEALEILQKFAVDVYNGKVSEDRLRFGAPWRHPPQIDDPKLRMEWAKLQLMDFVQSLANTEFGVNYRIDYSEEIFDDPSTFALLQVGLLYAQRDPPFLRPISKGIQRCLVRWLAQQWMQLNFHNWIHFVWHRMIRGRYYRHLM

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