Glyma20g04366 - SoyBase

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Report for Sequence Feature Glyma20g04366

Feature Type:	gene_model
Chromosome:	Gm20
Start:	4519485
stop:	4522629
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma20g04366

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PTHR13083	Panther	UNCHARACTERIZED	JGI		ISS
PF00400	PFAM	WD domain, G-beta repeat	JGI		ISS
UniRef100_G7IDV8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: WD repeat-containing protein n=1 Tax=Medicago truncatula RepID=G7IDV8_MEDTR	SoyBase	E_val: 9.00E-156	ISS
UniRef100_UPI000233C7B2	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233C7B2 related cluster n=1 Tax=unknown RepID=UPI000233C7B2	SoyBase	E_val: 9.00E-175	ISS

Expression Patterns of Glyma20g04366

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma20g04366 not represented in the dataset	Glyma20g04366 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma20g04366 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.20g033200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma20g04366

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma20g04366

Limit To All Plant Sequences

>Glyma20g04366.1   sequence type=CDS   gene model=Glyma20g04366   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATATGGACATATGATACATCAACTCCAGTGTCTAGAAATGCAACCATATATTGCAGCACTGAAATTTTGTCACTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTTATAGGTACATCCGATGGGTGCATTAAGGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGACCTCAACACAACCGAAGCATTTCCAAGTGTATTGGACATAAAGTGCAGTCCTGTGGAACCTATTTTTGTGTCTGCAGCAGCATCTGGAGGGGCTGGTTCTAACTATATTGACAACCTGGGTTTTGCTTCACTTACTGTGTGGAACATGAAGACATGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCACCAGCAATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCCGTTGATGGAACGATTCACATGTTTGACATGTCTGCTGGTCTACAAATCACTGGCTGGCCTGCACATGATTCTTCCATCAGTTCAATTCTGTTTGGACCAGATGAGACTAGCATTTTTAGCCTGGGCTCTGATGGGAAGATTTTTGAGTGGAGTTTGCAAAATCAAGGTCAAATCCTGTGGTCGAGAGACTCTAGTAGGTTTTGTTACCCCCTCAATGATTCAAAATATTGCAGACATGAGATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACATCCAGTTCATTTAGAGCACCCATATACCAGGTTAATGATTCGTGGTGA

Predicted protein sequences of Glyma20g04366

Limit To All Plant Sequences

>Glyma20g04366.1   sequence type=predicted peptide   gene model=Glyma20g04366   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MIWTYDTSTPVSRNATIYCSTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLNTTEAFPSVLDIKCSPVEPIFVSAAASGGAGSNYIDNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGTIHMFDMSAGLQITGWPAHDSSISSILFGPDETSIFSLGSDGKIFEWSLQNQGQILWSRDSSRFCYPLNDSKYCRHEMALDANGRRLLVTSSSFRAPIYQVNDSW*

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