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Report for Sequence Feature Glyma20g00910
Feature Type: gene_model
Chromosome: Gm20
Start: 635603
stop: 642135
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma20g00910
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G20970 AT
Annotation by Michelle Graham. TAIR10: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:7314338-7319246 FORWARD LENGTH=1364
SoyBase E_val: 1.00E-119 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_Q9SYP0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: F9H16.4 protein n=1 Tax=Arabidopsis thaliana RepID=Q9SYP0_ARATH
SoyBase E_val: 7.00E-104 ISS
UniRef100_UPI000233D962 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233D962 related cluster n=1 Tax=unknown RepID=UPI000233D962
SoyBase E_val: 0 ISS
Expression Patterns of Glyma20g00910
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma20g00910
Paralog Evidence Comments
Glyma07g19850 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma20g00910 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.20g006500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma20g00910
Coding sequences of Glyma20g00910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma20g00910.1 sequence type=CDS gene model=Glyma20g00910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACGGAGGAGCAGGTGGTGAATGTGCGCGGCGAAGTAAGCGATTCCGTCACCGATCACCGCAGCGTCAAGGCCAATGGAGTTGCTCACGGTGTCGGTGGCGATTTGGATCTTGCCGCCGACAACAACGGTGCTGCGTTGTCGGAGAAAATTTGTAAAGATGCAGTGTCTAACGGTACGGCAGAGGAAGTTTCCGAAACGGCGATGGTTAATGTCGTTTCGCGGGATGATGAATTAAAATGTGCGGATGGTCAAAACGACACGGGATCCGTTCAAAACGGCGTCGTGGAGAATGATGATAAGAGTGCTAATGCTGTTGCGGAGGAGTTGGTTACGGATCACGATGAATACGTTGTCGTCGGTGATTCGGATGTTCAGAACGGTGATGATGTGAATGCGAACGCTAACGGAGTTGAGGAATGCGAAATGCTGGATGGTGCGGAGGGTTCGGGAGATGAAAACGGTGTCGTTGTGAGTGCTGTGGAGGGAGATGCTGATGTGAATCACAGTGATCGCGAATTCGAATGTGTTGATGTTCACAATGATGTCGCGGTGGAAACAGTTGAGGAAGAAGTAACTGCTACTACTGATCAGAACGTTGGAAATGGAAATGACGTTCAGGGAAGAAGTGAGTCTGTATCTGATGAAGATGTGGATAAAAGTGGGGAAAGTGTAAATGTCGTTAGTGCAGATGTTTTGGATGAGAAGGACATTGTAACTGATGGTGATCATGATGCGGAAGAAGTTCTTGAGAAGAATGAGATTCTTGTTGATGCTGATGGTGTCTCTGCCACTACAGATTTGAAGCAATGTGAACCTGAAGATGCTCGAAACAGTTCAGAGAAGGGGCAGGTTGAGTCTGTCTCAGGTTTGGCAAAGCCGGAGCCAAGTGAATGCACTGAGGAGAATGAGATAGCTGTTGAAGGTGAACCAGGCAGTAAGTTGGAAAGGTCCGAGGAGGAAGCAGGAAGTGAAATAGTTCCTCAAGGAGAAAATTTAACAGCCTTAAACAGCACAGATGTGACTGGGGATGGTGATGTTGTGTCTGACATTGCAGTGGAGAGCAAAGATGAACCTTCTGTTGATGTTTGTGAGTTGAAAAGCATTGCAGTTGAAAATGATGTTGATGTGCAAGAGTTGAAAAATGGTGCAGTGCAGAGTGAAATTGTGTCTGAGATGAAAAACAATACAGAGGAGAGTGTAGCTGAACCTTCAAATGGTGCAGTTGAGAGTGAAGCTGAACCTTCAAATGGTGCTGTAGAAAGTGAAGCTGACCCTTCTAATGGTGCAGTTGAGTGGGAAACTGAACATTCAAATGGTGCAGTTGAGAGGGAAACTGAACATTCAAATGGTGCAGTTGAGAGTGTAGCTGAACCTTCAAATGGTGCTGTTGAGAGTGTAGCCGAACCTTCAAACAGTGCAGTTGATCGTGAAGATGAACCTTCAAATGGTGCAGTTGATAAGGAAGCTGAGCCTTCAAATGGTGCAGTTGATAAGGAAGCTGAGCCTTCAAATGGTGCAGTTGATAAGGAAGCTGAACCTTCAAATGGTACAGTTGAGAGGGAAGCTGAACCTTCAAATGGTGCAGTGCAGAGTGAAGCTGAACCTTCAAATGGTGCAGTGGGGAGTGTAGCTGAGCCTTCAAATGGTGCAGTGGGGAGTGTAGCTGAACCTTCAAATGTTGCAGTCGAGAGTGAAACTGACCCTTCTAATGGTGCACTAGAGAGTGAAACTGACCCTTCTAATGGTGCAGTAGAGAGTGAAGCTGAACCTTCAAATGGTGCAGTTGAGAGTGTAGCTGAACTTTCAAATGGTGCAATTGAGAGTGTAGCCAAACTTTCAAACAGTGCAGTTGATAGTGAAGCTGAACCTTCAAACGGTGCAGTTGATAGTGAAGCTGAGCCTTCAAATGGTGCTGTTGATAAGGAAGCTGAGCCTTCAAAGGGTACAGTGGAGAGTGAAGCTGGACCTTCAAATGGTGCAGTGGAGAGTGAAGCTGAACCTTCAAATGGTGCAGTGGAGAGTGAAGCCGAACCTTCAAATGGTGCAGTGCGGTGTGTAGCTGAACCTTCAAATGGTGCAGTGGAGAGTGAAGCTGAACCTTCAAATGGTGCAGTGGCGAGAGAAGCTAAACCTTCAAATGGTGCAGTGGAGAGTGAAGCTGAACCTTCACAAGGTGCAGTAGATAGTGAAGCTGAACCTTCAAATGGTGCAGTGGAGAGTGAAGTTAAACCTTCACAAGGTGCAGTGGAGAGCGAAGCTGAGCCTTCACAAGATGCAGTGGAGAGTGAAGCTGAACTTTCAAATGGTGCAGTGAACCGTGAAGCTGAAACAGCAAGTGGTGCAGTGGAGAGTGAAGCTAAAACTTCAAGTGGTGCAGTGGAGACTGAAGTTAAACCTTCACATGGTGTAGTTGAGAGTGAAGCTAAACCTTCAAATGGTGTAGCTGAGAGTGAAAGTGAACCTTCTGTTGATGTGTGTGAGACGAAAAACGATGTAGTGAATAGTGAAGCTGAAACTTCAAGTGGTGCCCTGCAGAGTGAAAGAGAGGCTTGTGTTGTGTCTGAGATGAAAAACAATGCAGTGGAGAGTGAAGCTCAACCTTCCGTTGATGTGTCTGAGAAGAAAACTAATGCAGTTGACAGTGAAGCTGAACTTTCAGTTAAAGGTGGGCTTTCTGTTGAAAGTGAAGGTAGTAATCAAGGAGATGAAGATTCAAGACCTGCCTCAGATGCTTTGGATGGACAGAATGTGGGTACAGAGGTAGTGAAAAAGCCATTCTACTATTTGATCAGGGTTCCCAGATATGATGATGATGAAAACATAAAAGAGAAGATAAAAAACGCTCTTCACCAAGTAGAGGAGAAGACTAAAATTCGAGATGCTATTCGAATCGAAAGCCAGACTATAAAGGCCAGTTGTAAGGATTTCGACCAAGAGTTTAGGGCTGCAATAGCAGCCCATAGAGCTGCTCGTGACTTGCTCAAATCCAAACGCCAGGAAATAGATTCAGTCCAATCCACAATGAACAGATTAAACAATGCAATTTCTGTTGGGGATATAGATGACAAGATAAGAAGCATGGAACACATGATCCAGCATGAAACTTTGCCTCTAAATAAAGAAAAGCAATTGATACGCGAGATCAAACAATTGAAGCAGAACCGTGAGGAGTTGTCTTCTAATATGAAAAAGCAGGATCAATCACAACAATCTGTAGACAACAAGGATGACAATATTGAAGAGCACTTTAAGCATTTACAGCTTTTGAAGAAGGAAATGGAAGTGCTTAGAAATAATGTTCTGAAGTCAGATACAGAAACTAAAGCCGCAAAGAAGAAATATAATGATGAATGTGATAAACTGAATGAGTTGCTAGCTCGATTTAGGGCCGCTGATGATTCTCGTCAAGAGGCATATGCTAAGTTACTGGCTTTGAAAAAACAATTGCATGAGAAGAGCAAAAATTTCTGGGAATACAGAGATGCTGCAAATAAAGCACAGGAACTAGCAGCGGGAGGAAAAAAAGAGGAGCTGCAATGCTTCTGTGTTGATCAGGTTGAGAGAATTATGGAGCTATGGAACAAAAATGATGGGTTCAGAAGGGACTACGTCCGATGCAACACTAGGAGTACGCTGAGGAGACTGCAAACCCTGGATGGCCGATCACTTGGTCCTGATGAAGAGCCCCCTGTAATTCCTAATGTAATAACTGAAAGAGCTTCCAAAAATATTCCCATGGTCTTGCAGTCAACTCTGGAACAAGAAAAGAAATCGACACCAACAGAATCTGTTAATGTAAAGGATGAACCTGTTTCGAAGGTTGTGGTACAAAGAACTGAAACGAGTCAGACAACTAAAGCTAAGAAGCCTACCAAACCTGCTCCCTTAGAGAAGCATGTGGCTCGTTGGGGTGATGAGTCTGATGAAGATGAAGTTAAAAAAGAAGAACCTGTGAGAACAAAGGAGGAAGAGGAGTTGATACTGAAGGCTGAGAAGGCAAGGATGGAGGAAGAGGAGGCAAAGTTGAAGGAAAAGCGGAGGCTAGAGGAGATTGAGAAAGCTAAGGAGGCCCTGCTGAGGAAAAAGCGTAATGCAGAGAAGGCCCAACAAAGGGCTGCCTTAAAGGCACAAAAAGAAGCCGAACTGAAAGAGAAGGAAAGGGAGAAGAGAGCAAAGAAGAAGGAAAGAAGAAAGGCAGGTTCTGCTGTCACTGCAGAGAATACAGAACAAGAATCTGCTCCTATCCCAGAAACTCTAACAAGAAGCGTGGAAGAGTTTGAACAGACTGAGAAAACAGCTGAGGTAACAAAAAAGCCACAGAAAACATCTCAATTCACGAGGCAGACCAAGGTAAAATCTGTACCCGCAGCTCTTCGCAACCGGGGTAAGAGGCGAATTCAACCATGGGTATGTGTTCTAATTGCGCTTGTCGTTGCTGTTGCCTTGTTTTATGTTGGCCATAACTGCTCTTTGAGATCTTCGCTCGAAGGCTTTGGTTACTGA
Predicted protein sequences of Glyma20g00910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma20g00910.1 sequence type=predicted peptide gene model=Glyma20g00910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTEEQVVNVRGEVSDSVTDHRSVKANGVAHGVGGDLDLAADNNGAALSEKICKDAVSNGTAEEVSETAMVNVVSRDDELKCADGQNDTGSVQNGVVENDDKSANAVAEELVTDHDEYVVVGDSDVQNGDDVNANANGVEECEMLDGAEGSGDENGVVVSAVEGDADVNHSDREFECVDVHNDVAVETVEEEVTATTDQNVGNGNDVQGRSESVSDEDVDKSGESVNVVSADVLDEKDIVTDGDHDAEEVLEKNEILVDADGVSATTDLKQCEPEDARNSSEKGQVESVSGLAKPEPSECTEENEIAVEGEPGSKLERSEEEAGSEIVPQGENLTALNSTDVTGDGDVVSDIAVESKDEPSVDVCELKSIAVENDVDVQELKNGAVQSEIVSEMKNNTEESVAEPSNGAVESEAEPSNGAVESEADPSNGAVEWETEHSNGAVERETEHSNGAVESVAEPSNGAVESVAEPSNSAVDREDEPSNGAVDKEAEPSNGAVDKEAEPSNGAVDKEAEPSNGTVEREAEPSNGAVQSEAEPSNGAVGSVAEPSNGAVGSVAEPSNVAVESETDPSNGALESETDPSNGAVESEAEPSNGAVESVAELSNGAIESVAKLSNSAVDSEAEPSNGAVDSEAEPSNGAVDKEAEPSKGTVESEAGPSNGAVESEAEPSNGAVESEAEPSNGAVRCVAEPSNGAVESEAEPSNGAVAREAKPSNGAVESEAEPSQGAVDSEAEPSNGAVESEVKPSQGAVESEAEPSQDAVESEAELSNGAVNREAETASGAVESEAKTSSGAVETEVKPSHGVVESEAKPSNGVAESESEPSVDVCETKNDVVNSEAETSSGALQSEREACVVSEMKNNAVESEAQPSVDVSEKKTNAVDSEAELSVKGGLSVESEGSNQGDEDSRPASDALDGQNVGTEVVKKPFYYLIRVPRYDDDENIKEKIKNALHQVEEKTKIRDAIRIESQTIKASCKDFDQEFRAAIAAHRAARDLLKSKRQEIDSVQSTMNRLNNAISVGDIDDKIRSMEHMIQHETLPLNKEKQLIREIKQLKQNREELSSNMKKQDQSQQSVDNKDDNIEEHFKHLQLLKKEMEVLRNNVLKSDTETKAAKKKYNDECDKLNELLARFRAADDSRQEAYAKLLALKKQLHEKSKNFWEYRDAANKAQELAAGGKKEELQCFCVDQVERIMELWNKNDGFRRDYVRCNTRSTLRRLQTLDGRSLGPDEEPPVIPNVITERASKNIPMVLQSTLEQEKKSTPTESVNVKDEPVSKVVVQRTETSQTTKAKKPTKPAPLEKHVARWGDESDEDEVKKEEPVRTKEEEELILKAEKARMEEEEAKLKEKRRLEEIEKAKEALLRKKRNAEKAQQRAALKAQKEAELKEKEREKRAKKKERRKAGSAVTAENTEQESAPIPETLTRSVEEFEQTEKTAEVTKKPQKTSQFTRQTKVKSVPAALRNRGKRRIQPWVCVLIALVVAVALFYVGHNCSLRSSLEGFGY*