SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G27380 | AT | Annotation by Michelle Graham. TAIR10: glutathione synthetase 2 | chr5:9668211-9670912 REVERSE LENGTH=539 | SoyBase | E_val: 0 | ISS |
| GO:0006499 | GO-bp | Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation | SoyBase | N/A | ISS |
| GO:0006750 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glutathione biosynthetic process | SoyBase | N/A | ISS |
| GO:0009407 | GO-bp | Annotation by Michelle Graham. GO Biological Process: toxin catabolic process | SoyBase | N/A | ISS |
| GO:0009723 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus | SoyBase | N/A | ISS |
| GO:0009753 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus | SoyBase | N/A | ISS |
| GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0004363 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: glutathione synthase activity | SoyBase | N/A | ISS |
| GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
| GO:0016874 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ligase activity | SoyBase | N/A | ISS |
| KOG0021 | KOG | Glutathione synthetase | JGI | ISS | |
| PTHR11130 | Panther | GLUTATHIONE SYNTHETASE | JGI | ISS | |
| PF03199 | PFAM | Eukaryotic glutathione synthase | JGI | ISS | |
| PF03917 | PFAM | Eukaryotic glutathione synthase, ATP binding domain | JGI | ISS | |
| UniRef100_A2Q600 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Eukaryotic glutathione synthase; Eukaryotic glutathione synthase, ATP-binding n=1 Tax=Medicago truncatula RepID=A2Q600_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_I1NC22 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1NC22_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma19g42620 not represented in the dataset |
Glyma19g42620 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.19g237900 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g42620.1 sequence type=CDS gene model=Glyma19g42620 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCTCAACATATTTATGGCATCTTCGACTACCATCGTCTTCATCAGCAATTCCTTCACACTATCGCCTACGATGCTCTCGTTTGGACCTCTCTCCACGGCCTCCTTGTTGGTGACAAATCCGTTCAGAGATCGGGAAGCGTTCCTGGCGTGGGATTGGTGCATGCCCCAGTTGCCTTGTTTCCCACGCCATTTCCGGAAAACCACTGGAGAGAAGCCTGTGAGTTAGCCCCTATATTCAATGAACTCGTTGATCGGGTCAGTTTGGATGCAACGTTTCTCCACGACTCTCTCTCCAGAACCAAGAAAGCGGATGAATTCACCTCTAGACTTTTGGATATTCATTCCATGATGATACAGATTAACAAAAAAGAGGAAATACGATTGGGGTTACATCGTTCAGATTATATGCTTGATGAAAAGACTAAATCACTTTTGCAAGTAGAACTGAACACTATTGCCTCTTCATTTGCGAGTCTTAGTAATCTTGTAACTGAACTTCATAGATACATACTTTCTTGCCATGGAAAATTGCTTGAACTAGATTCCAAAAGGATTCCTGCCAACGATGCTGTCAATCAGTATGCAGATGCCTTGGCTAAAGCTTGGAGTGAGTATAATAACCCCAGGGCTGTGATTATGATTGTGGTTCAGGCTGAAGAACGAAACATGTACGACCAGCATTTTGTTTCTGCACTTTATAACACGCATAATATTACAACTATACGGAAAACATTGACAGAAGTTGATCAAGAAGGAGAAATTCTACCAGATGGAACACTTTCTGTGGATGGAGAAGCAATTTCAGTCATTTATTTCCGAGCAGGCTATACACCAGACGACTATCCTTCAGAATCAGAATGGAGAGCTAGGCTACTGATGGAACAATCTTCTGCTGTCAAATGCCCTTCAATATCCTATCATTTGGTTGGCACCAAAAAGATTCAACAGGAACTTGCAAAGCCTGGTGTTCTTGAAAGGTTCCTTGATAACAAAGATGACATTGCCAAACTGCGTAAATGCTTTGCTGGGTTGTGGAGTTTGGATGACTCAAATATTGTTAGAAAAGCAATTGAAAGGCCCGAGTTATTTGTGATGAAGCCCCAAAGAGAAGGAGGAGGAAACAATATTTATGGTGATGATGTGAGGGAAACCCTCCTAAAGTTGCAGAAAGCAGATTCTCAAGAAGATGCAGCTTATATCCTTATGCAGAGGATATTTCCATCTATTTCTGCAACAGTTCTGTTGCGTAACGGTTGTTGGCATAAGGATCATGCCATTTCAGAACTTGGGATATTTGGTACTTATTTAAGGAATAAGAATAAGGTTATCATGAACGAACAAAGTGGTTATTTGATGCGTACAAAAGTATCATCATCTGACGAAGGTGGGGTTGCAGCTGGTTTTGCAGTGCTAGATAGTGTATACTTGACTTGA
>Glyma19g42620.1 sequence type=predicted peptide gene model=Glyma19g42620 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSQHIYGIFDYHRLHQQFLHTIAYDALVWTSLHGLLVGDKSVQRSGSVPGVGLVHAPVALFPTPFPENHWREACELAPIFNELVDRVSLDATFLHDSLSRTKKADEFTSRLLDIHSMMIQINKKEEIRLGLHRSDYMLDEKTKSLLQVELNTIASSFASLSNLVTELHRYILSCHGKLLELDSKRIPANDAVNQYADALAKAWSEYNNPRAVIMIVVQAEERNMYDQHFVSALYNTHNITTIRKTLTEVDQEGEILPDGTLSVDGEAISVIYFRAGYTPDDYPSESEWRARLLMEQSSAVKCPSISYHLVGTKKIQQELAKPGVLERFLDNKDDIAKLRKCFAGLWSLDDSNIVRKAIERPELFVMKPQREGGGNNIYGDDVRETLLKLQKADSQEDAAYILMQRIFPSISATVLLRNGCWHKDHAISELGIFGTYLRNKNKVIMNEQSGYLMRTKVSSSDEGGVAAGFAVLDSVYLT*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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