Glyma19g37360 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma19g37360

Feature Type:	gene_model
Chromosome:	Gm19
Start:	44536729
stop:	44539967
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma19g37360

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G36630	AT	Annotation by Michelle Graham. TAIR10: Sulfite exporter TauE/SafE family protein \| chr2:15352767-15355050 REVERSE LENGTH=459	SoyBase	E_val: 0	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0016021	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane	SoyBase	N/A	ISS
PTHR14255	Panther	ATP-DEPENDENT PROTEASE (CEREBLON)	JGI		ISS
PF01925	PFAM	Sulfite exporter TauE/SafE	JGI		ISS
UniRef100_Q75GI8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Expressed protein n=1 Tax=Oryza sativa Japonica Group RepID=Q75GI8_ORYSJ	SoyBase	E_val: 1.00E-168	ISS
UniRef100_UPI000233E168	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233E168 related cluster n=1 Tax=unknown RepID=UPI000233E168	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma19g37360

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma19g37360 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.19g189500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma19g37360

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma19g37360

Limit To All Plant Sequences

>Glyma19g37360.1   sequence type=CDS   gene model=Glyma19g37360   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCCACCAAAGGCTTCATCATCTATCTCCTATCCTCTTTCTCTGTCGCGCTTCTCTCTGCGTTGTTACTCCCCCGAACCAGCAACTACAAACATTATTCGTCAATATCTCCTCCCTCGCATGATTATGGATTCGGAAACGATAAACTTTGGCCCGAATTGAAGGTGGGTTGGAGAGTTGCGTTGGCCACAGTTATTGGGTTTCTGGGATCTGCTTTTGGAACCGTTGGAGGGGTAGGTGGGGGTGGCATTTTCGTTCCCATGCTCACTCTCATTGTTGGTTTTGATACCAAGTCAGCTGCTGCTCTTTCTAAATGTATGATAATGGGGGCGTCAACAGCGTCCGTTTGGTATAACCTGAGAGTGCCTCATCCAACCAAAGAGGTACCTATAATAGACTATGATCTGGCCCTTCTTTTTCAGCCCATGCTCATGCTTGGTATTACTGTTGGTGTCGTCCTCAGTGTTGTCTTCCCCTACTGGCTCATCACCGTTCTTATTATTATTCTCTTCATTGGTTCTTCTTCAAGGTCTTTCTTTAAGGGAACTCAGATGTGGAGGGAAGAGACTCTTCTCAAGAAAGAAATGGCCAGGCAACGAGCAACTTTAGTTAATTTTCGTGGCGAACTTCTAATTGACACAGAATATGAGCAGTTGTTTCCTAAAGAAGAGAAATCATCTATGCAAATTTTTTGTTTCAACCTCAAATGGAAAAGGATTTTGATACTAATGTTCGTGTGGGTTTCTTTCCTACTACTTCAAGTCATCAAGAATGATGTAAAGATCTGCAGTGTATGGTATTGGGTGCTTTTCTGCTTACAGTTTCCTATTGCACTTTTGGTGTTTGGCTACGAAGCAGTGAAGTTGTACAAGGGTCACAAAGAGAGAGTGAGCACAGGAAACCCGGAATCCATATGTGAGGCATCAATTGAATGGACTGTTCTGCACATTTTATTTTGTGCACTATGTGGAATCTTAGGAGGAACTGTTGGAGGCCTACTTGGTTCTGGAGGTGGCTTCATTTTAGGCCCTCTTCTCATTGAGATTGGTGTCATCCCTCAGGTTGCTAGTGCTACAGCAACGTTTGTGATGATGTTTTCATCATCTTTGTCTGTGGTGGAATTCTACCTTCTCAAGAGGTTCCCCATTCCTTATGCATTATACCTCACCGCAGTGTCTGTTTTGGCTGGCTTTTGGGGACAGTATTTTGTAAGGAAATTGATGGTAATTCTTAAAAGGGCCTCAATCATTGTATTCATCCTCTCAGGGGTCATTTTTGCTAGCGCTCTCACCATGGGTGTCGTTGGCATTGACAAGAGCATTAAAATGATCCAACACCATGAGTTCATGGGTTTTCTAGACTTCTGCAGCAGTCAATGA

Predicted protein sequences of Glyma19g37360

Limit To All Plant Sequences

>Glyma19g37360.1   sequence type=predicted peptide   gene model=Glyma19g37360   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSTKGFIIYLLSSFSVALLSALLLPRTSNYKHYSSISPPSHDYGFGNDKLWPELKVGWRVALATVIGFLGSAFGTVGGVGGGGIFVPMLTLIVGFDTKSAAALSKCMIMGASTASVWYNLRVPHPTKEVPIIDYDLALLFQPMLMLGITVGVVLSVVFPYWLITVLIIILFIGSSSRSFFKGTQMWREETLLKKEMARQRATLVNFRGELLIDTEYEQLFPKEEKSSMQIFCFNLKWKRILILMFVWVSFLLLQVIKNDVKICSVWYWVLFCLQFPIALLVFGYEAVKLYKGHKERVSTGNPESICEASIEWTVLHILFCALCGILGGTVGGLLGSGGGFILGPLLIEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIPYALYLTAVSVLAGFWGQYFVRKLMVILKRASIIVFILSGVIFASALTMGVVGIDKSIKMIQHHEFMGFLDFCSSQ*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain