SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma19g37161

Feature Type:gene_model
Chromosome:Gm19
Start:44384363
stop:44386656
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma19g37161
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G36760AT Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 73C2 | chr2:15413042-15414532 REVERSE LENGTH=496 SoyBaseE_val: 4.00E-56ISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0008194GO-mf Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PTHR11926:SF15Panther UDP-GLUCURONOSYLTRANSFERASE RELATED JGI ISS
UniRef100_G7L4X4UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glucosyltransferase-14 n=1 Tax=Medicago truncatula RepID=G7L4X4_MEDTR SoyBaseE_val: 2.00E-71ISS
UniRef100_I1NAE7UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1NAE7_SOYBN SoyBaseE_val: 3.00E-102ISS

Expression Patterns of Glyma19g37161
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g37161 not represented in the dataset
Glyma19g37161 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma19g37161
ParalogEvidenceComments
Glyma03g34480 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma19g37161 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma19g37161
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma19g37161
>Glyma19g37161.1   sequence type=CDS   gene model=Glyma19g37161   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATCCCAAGCACCTCAGCTTCACTTTGTTCTGTTTCCTCTCATGGCCCCCGGCCACTTGCTCCCCATGACAGACCTTGCAACAATATTAGCACAGCATAGCAACATTGTTACAGTAGTCACAACCCCACATAACGCTTCTCGTTTATCAGAAACTTTTGCTCGTGCTTCTGACTCAGGCCTACACCTCCGATTAGTTCAACTCCAATTTCCATCACAAGATGCTGGACTTCCAGAAGGGTGTGAGAATTTTGACATGCTTCCTTCAATGGGTATGGGCTTGAGTTTCTTCCTTGCTGCAAACAACTTTCTGCTGGAACCAGCTGAGAAAGTGTTTGAAGAGTTAACACCAAAACCAAACTGCATCATCTCTGATGTGAGTTTGGCATACACAGCCCACATCGCCACCAAATTCAACATCCCCAGAATTTCTTTCTACGGAGTTAGCTGCTTCTGTCTCTTGTGA
Predicted protein sequences of Glyma19g37161
>Glyma19g37161.1   sequence type=predicted peptide   gene model=Glyma19g37161   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASQAPQLHFVLFPLMAPGHLLPMTDLATILAQHSNIVTVVTTPHNASRLSETFARASDSGLHLRLVQLQFPSQDAGLPEGCENFDMLPSMGMGLSFFLAANNFLLEPAEKVFEELTPKPNCIISDVSLAYTAHIATKFNIPRISFYGVSCFCLL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo