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Report for Sequence Feature Glyma19g35850

Feature Type:gene_model
Chromosome:Gm19
Start:43295793
stop:43296456
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Expression Patterns of Glyma19g35850
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma19g35850
ParalogEvidenceComments
Glyma03g33141 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma19g35850 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.19g174900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma19g35850
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma19g35850
>Glyma19g35850.1   sequence type=CDS   gene model=Glyma19g35850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACGAAAAAAATCTTTTCCTACACACCGAAATTACTGTGTGGATTTCAACTCCGCCTATTATCTGATGCCGTATGTTTTATTCTTTTGTCAGATTGGATTATTTTTTTTGTTGTTTCCATAAGTTTTGCATTTAATTTGGGTTTTTTTTTGTCTGGTTTAGATGAAACTGTTCTGCCCCTTTGTTTATATGTTGAGGTGGATGTAATCTGA
Predicted protein sequences of Glyma19g35850
>Glyma19g35850.1   sequence type=predicted peptide   gene model=Glyma19g35850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTKKIFSYTPKLLCGFQLRLLSDAVCFILLSDWIIFFVVSISFAFNLGFFLSGLDETVLPLCLYVEVDVI*






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