Report for Sequence Feature Glyma19g34760
Feature Type: gene_model
Chromosome: Gm19
Start: 42353044
stop: 42353925
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g34760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G20500 AT
Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8835300-8835710 REVERSE LENGTH=136
SoyBase E_val: 1.00E-12 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1N9R1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N9R1_SOYBN
SoyBase E_val: 9.00E-126 ISS
Expression Patterns of Glyma19g34760
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma19g34760
Paralog Evidence Comments
Glyma03g31990 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g34760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g164700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g34760
Coding sequences of Glyma19g34760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g34760.1 sequence type=CDS gene model=Glyma19g34760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAATCCTGCATAAGCCTAAGGCTAAGGCTAAGCCTTCCACCTGCTAGAAAGGCATGGAAGAGCTTCACTTCCACCCTTGGTAAGCTTCATAAGTCCAAATCCAAAGCCATGAAGAAACCTAGAAAGCATTATTCAAAAACTACCACTAAAAAGGTTACCAAGGCCCCTCCTAAGTTCCTTGCTACCAAACGTTTTCGCAGCAAAAAGTTAGCCTTAGCCACAGTGAGAAGCTTCATCTTCGGGTTCCACAAGAAGCCTGCACCTGTGTATATTGACAAGCTCTTTAGAGAGCCTTCATGTGACTTGGTGGGGCATTTGAAGCCACAGACAGCACACAAGCCACGAACTGAAAGGCTCTCTGGGGGAGAAGAAACAACAAAGGGTTGTGGATCTTGCAGTTCAGATGACGTGTGGGAATCTTTGGCTTTAGCTTCACCTCAAATGCAAGGAATAGATGAACGAGCAGAGGAGTTCATCACTAGATTCAGACAAGAGATGGCAGAGCAAGAGATGATAGCAAGAAATTTGTAG
Predicted protein sequences of Glyma19g34760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g34760.1 sequence type=predicted peptide gene model=Glyma19g34760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKSCISLRLRLSLPPARKAWKSFTSTLGKLHKSKSKAMKKPRKHYSKTTTKKVTKAPPKFLATKRFRSKKLALATVRSFIFGFHKKPAPVYIDKLFREPSCDLVGHLKPQTAHKPRTERLSGGEETTKGCGSCSSDDVWESLALASPQMQGIDERAEEFITRFRQEMAEQEMIARNL*