Report for Sequence Feature Glyma19g34480
Feature Type: gene_model
Chromosome: Gm19
Start: 42072643
stop: 42074181
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g34480
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G63450 AT
Annotation by Michelle Graham. TAIR10: cytochrome P450, family 94, subfamily B, polypeptide 1 | chr5:25408987-25410519 REVERSE LENGTH=510
SoyBase E_val: 1.00E-154 ISS
GO:0009611 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to wounding
SoyBase N/A ISS
GO:0009694 GO-bp
Annotation by Michelle Graham. GO Biological Process: jasmonic acid metabolic process
SoyBase N/A ISS
GO:0009753 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0005506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: iron ion binding
SoyBase N/A ISS
GO:0009055 GO-mf
Annotation by Michelle Graham. GO Molecular Function: electron carrier activity
SoyBase N/A ISS
GO:0016705 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
SoyBase N/A ISS
GO:0019825 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxygen binding
SoyBase N/A ISS
GO:0020037 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heme binding
SoyBase N/A ISS
KOG0157
KOG
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
JGI ISS
PTHR24296 Panther
FAMILY NOT NAMED
JGI ISS
PF00067 PFAM
Cytochrome P450
JGI ISS
UniRef100_I1N9N7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N9N7_SOYBN
SoyBase E_val: 0 ISS
UniRef100_O81117 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 94A1 n=1 Tax=Vicia sativa RepID=C94A1_VICSA
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g34480
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma19g34480
Paralog Evidence Comments
Glyma03g31680 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g34480 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g162100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g34480
Coding sequences of Glyma19g34480
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g34480.1 sequence type=CDS gene model=Glyma19g34480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATTGAGAACATACTTCTGAATTTGCAGCTTTTAGCACCTTTCTTCCTCTTATTCATCTTCCCAGTGCTTCTGTTCTTCTTTTTCTCGTCTTCAGGTTCCAAAAAGAAAGAGGCAAGCATAACCACCATCCCAAAGCCATACCCACTTATTGGTCACTACTTAGACCTCAAAGGCGTCGGTAACCGCCGTATCCAGTGGCTATCCGATATCGTCAAAATCTCACCGGCCGCCACTTTCACCCTCCACCGCCCCTTGGGCAGCCGCCAAGTCATCACCGGCAACCCCGCCACCGTAGAGCACATTCTCAAGACCCGTTTCTCCAACTATATAAAGGGCTCCATCTTTATTAACAACCTCTCCGATTTCCTCGGCACCGGAATCTTCAACGCCGACGGCAACACTTGGAAGTTTCAGAGGCAAGTCGCCAGCCACGAATTCAACACTAAGTCTCTCCGCAAATTCGTCGAACACGTGGTTGATGTCGAACTCTCCGACCGTCTCGTCCCCGTCCTCGCTTCAGCAGCACAACAAGACCAAACCCTCGATTTCCAAGACATCCTCCAACGTTTCGCGTTCGACAACATCTGCAAAATCGCGTTCGGGTATGACGCCGAGTACCTGACGCCGTCAACTGAACAGAGTAAGTTCGCAGTAGCGTACGAAGAAGCGACGGAGATCAGCAGCAAACGGTTCCGCGAGCCGTTACCGTTAGTGTGGAAAATCAAGAGATTGCTTAACATAGGTTCGGAAAAGAGACTAAGAATAGCGGTGAAAGAAGTGCGCGATTTCGCGAAGAAGATAGTGAGAGAGAAGAAAAAGGAGCTGAAGGAGAAGGAATCTCTTGAACAGGTTGACATGCTATCGCGGTTCTTAAGTTCGGGGCACTCCGACGAGGACTTCGTCACTGACATAGTTATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCTGCGCTGATGTGGTTTTTCTGGCTACTATCGAAGAACCCGGGCGTGGAGAAGGAGGTTTTGAAGGAGATAATGGAGAAACCAGAGACTCCGGCGTACGATGAAGTGAAGGACATGGTTTACATCCATGCAGCGTTGTGTGAGAGCATGAGGCTCTACCCTCCGGTGTCGATGGACTCGAAGGAAGCAGTGGACGACGACGTTTTGCCGGATGGGACGGTGGTGAAGAAAGGGACGTTGGTGACGTATCACGTGTATGCGATGGGGAGGATGGAGAGTATTTGGGGCGAGGATTGGGCGGAGTTTAAGCCAGAAAGATGGTTGGAGAAGGTTGAAACGGGAAAGTGGAAGTTTGTGGGAAGGGATTCGTTCACTTATCCGGTGTTTCAGGCTGGTCCCAGGATTTGTTTGGGGAAGGAAATGGCATTTATGCAGATGAAGAGGTTGGTGGCTGGGATTCTGAGGCGCTTCACGGTGGTTCCGGCAATGGCTAAAGGGGTGGAGCCTCACTACTTTGCCTTCTTGACCTCCCAGATGGAAGGTGGATTCCCCGTCAAGATCATCGACAGGGAAGCTTCATGTTGA
Predicted protein sequences of Glyma19g34480
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g34480.1 sequence type=predicted peptide gene model=Glyma19g34480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MIENILLNLQLLAPFFLLFIFPVLLFFFFSSSGSKKKEASITTIPKPYPLIGHYLDLKGVGNRRIQWLSDIVKISPAATFTLHRPLGSRQVITGNPATVEHILKTRFSNYIKGSIFINNLSDFLGTGIFNADGNTWKFQRQVASHEFNTKSLRKFVEHVVDVELSDRLVPVLASAAQQDQTLDFQDILQRFAFDNICKIAFGYDAEYLTPSTEQSKFAVAYEEATEISSKRFREPLPLVWKIKRLLNIGSEKRLRIAVKEVRDFAKKIVREKKKELKEKESLEQVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALMWFFWLLSKNPGVEKEVLKEIMEKPETPAYDEVKDMVYIHAALCESMRLYPPVSMDSKEAVDDDVLPDGTVVKKGTLVTYHVYAMGRMESIWGEDWAEFKPERWLEKVETGKWKFVGRDSFTYPVFQAGPRICLGKEMAFMQMKRLVAGILRRFTVVPAMAKGVEPHYFAFLTSQMEGGFPVKIIDREASC*