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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma19g33710

Feature Type:gene_model
Chromosome:Gm19
Start:41309757
stop:41311988
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma19g33710
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G52420AT Annotation by Michelle Graham. TAIR10: outer envelope membrane protein 7 | chr3:19429775-19429969 FORWARD LENGTH=64 SoyBaseE_val: 2.00E-15ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0031359GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to chloroplast outer membrane SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_C6T4V0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6T4V0_SOYBN SoyBaseE_val: 4.00E-43ISS
UniRef100_Q41041UniRef Annotation by Michelle Graham. Most informative UniRef hit: Outer envelope membrane protein n=1 Tax=Pisum sativum RepID=Q41041_PEA SoyBaseE_val: 3.00E-12ISS

Expression Patterns of Glyma19g33710
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g33710 not represented in the dataset
Glyma19g33710 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma19g33710 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.19g154700 Wm82.a2.v1IGC As supplied by JGI

References for Glyma19g33710
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma19g33710
>Glyma19g33710.1   sequence type=CDS   gene model=Glyma19g33710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGAAGGCAAAAGAAGCGGCGGTGGTGGCGGGAGCCCTAGCATTCGCGTGGCTCGCTATAGAGCTCGCTCTCAAACCCTTCCTTACCAAGGCACGTGCTTCCATCGACAAGTCCGACCCGGCACGTGACCCCGACGACGATGCTCTTCCTAAAACCACCGCCGACGACGTTCCCGAAGCCTCCGCTGACGACGTGCCTGTCGCTGCTGATACCAAAACCACCGACGACGCCTGA
Predicted protein sequences of Glyma19g33710
>Glyma19g33710.1   sequence type=predicted peptide   gene model=Glyma19g33710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKAKEAAVVAGALAFAWLAIELALKPFLTKARASIDKSDPARDPDDDALPKTTADDVPEASADDVPVAADTKTTDDA*






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