Report for Sequence Feature Glyma19g32260
Feature Type: gene_model
Chromosome: Gm19
Start: 40020617
stop: 40025453
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g32260
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G19450 AT
Annotation by Michelle Graham. TAIR10: calcium-dependent protein kinase 19 | chr5:6558672-6561471 REVERSE LENGTH=533
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006499 GO-bp
Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0004683 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin-dependent protein kinase activity
SoyBase N/A ISS
GO:0004713 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity
SoyBase N/A ISS
GO:0005509 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calcium ion binding
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG0032
KOG
Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
JGI ISS
PTHR24349 Panther
SERINE/THREONINE-PROTEIN KINASE
JGI ISS
PTHR24349:SF13 Panther
JGI ISS
PF00036 PFAM
EF hand
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_I1N919 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N919_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q7XZK4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Calcium-dependent calmodulin-independent protein kinase isoform 2 n=1 Tax=Cicer arietinum RepID=Q7XZK4_CICAR
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g32260
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma19g32260
Paralog Evidence Comments
Glyma03g29450 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g32260 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g140800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g32260
Coding sequences of Glyma19g32260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g32260.1 sequence type=CDS gene model=Glyma19g32260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGAAACTGCTGCGCCACGCCGTCCACGGACGAAACGGCGAACAAGAAGGGCAAAAAGGGAAAAAAGGAAAACCCCTTCGCGATCGATTACGGTTTTAACGCCGCCGCCGCCGCCAACGGGTCGAAGCTCACCGTTCTGAAGTCCCCGACGGGCCGCGAGATCGAGGCCCGCTACGAGCTGGGCCGCGAGCTGGGTCGCGGTGAGTTCGGGATAACCTACCTCTGTACGGACAAGGAGACGGGGGAGGAGCTGGCCTGCAAGTCGATCTCGAAGAAGAAGCTTCGGACGGCGATAGACATCGACGACGTGAGGAGGGAGGTGGAGATCATGCGCCACTTGCCGCAGCATCCGAACATCGTGACCTTGAAGGATACCTACGAGGACGACAATGCCGTGCATCTCGTCATGGAGCTCTGCGAGGGTGGGGAGCTCTTCGACCGCATCGTGGCCCGAGGCCACTACACCGAACGCGCCGCCGCCGCCGTCACCAAGACCATCGTCGAAGTCGTTCAGATGTGCCACAAACAAGGTGTGATGCATAGGGATCTCAAGCCGGAGAACTTTTTGTTTGCAAATAAAAAGGAAACCGCAGCTCTGAAGGCTATAGATTTTGGGTTGTCGGTGTTCTTTAAACCAGGGGAAAGATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTGAAGAGAAATTATGGGCCAGAAGTGGACATCTGGAGTGCTGGAGTAATTCTATACATCTTACTTTGTGGTGTTCCGCCATTTTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATCATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCAAAAGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTAGATCCTGACCCGAGGCGGCGGCTTACTGCACAAGAAGTGTTAGATCATCCATGGTTACAAAATGCAAAGAAAGCTCCTAATGTTTCCTTAGGAGAAACTGTTAGAGCAAGGCTCAAGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTAAGGGTGATTGCTGAGCATTTGACAGTAGAAGAAGCTGCTGGGCTAAAAGAGGGATTCCAGCTTATGGATACAAACAACAGAGGCAAGATTAACATTGATGAATTACGAGTAGGGTTGCATAAACTTGGTCATCAAGTTCCCGAATCAGATGTCCAAGCTCTTATGGAAGCTGGTGATGTAGATGGGGATGGGCACCTAGATTATGGAGAGTTTGTAGCCATTTCTGTTCATCTAAGAAAGATGGGAAATGATGAGCATCTTCGCAAAGCCTTCCAATTTTTTGATCAGAACAAAAGTGAGTATATTGAGATTGAGGAGCTGCGTAGCGCCTTATCTGATGATCTTGACACAAACAGTGAAGAAGTTATCAGTGCAATTATGCATGATGTGGACACAGACAAGGATGGAAGGATAAGTTACGACGAATTTGCTACAATGATGAAGGCTGGCACAGATTGGAGAAAAGCATCAAGGCAGTATTCGCGAGAGAGGTTTGCCAGTCTGAGCCTAACGTTGATGAGGGACGGGTCATTGCATTTAAACAATGAAAAACAATAA
Predicted protein sequences of Glyma19g32260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g32260.1 sequence type=predicted peptide gene model=Glyma19g32260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGNCCATPSTDETANKKGKKGKKENPFAIDYGFNAAAAANGSKLTVLKSPTGREIEARYELGRELGRGEFGITYLCTDKETGEELACKSISKKKLRTAIDIDDVRREVEIMRHLPQHPNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKQGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLDPDPRRRLTAQEVLDHPWLQNAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLTVEEAAGLKEGFQLMDTNNRGKINIDELRVGLHKLGHQVPESDVQALMEAGDVDGDGHLDYGEFVAISVHLRKMGNDEHLRKAFQFFDQNKSEYIEIEELRSALSDDLDTNSEEVISAIMHDVDTDKDGRISYDEFATMMKAGTDWRKASRQYSRERFASLSLTLMRDGSLHLNNEKQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
