Report for Sequence Feature Glyma19g31910
Feature Type: gene_model
Chromosome: Gm19
Start: 39678756
stop: 39691436
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g31910
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G10310 AT
Annotation by Michelle Graham. TAIR10: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr3:3190208-3195005 FORWARD LENGTH=922
SoyBase E_val: 0 ISS
GO:0000226 GO-bp
Annotation by Michelle Graham. GO Biological Process: microtubule cytoskeleton organization
SoyBase N/A ISS
GO:0000911 GO-bp
Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation
SoyBase N/A ISS
GO:0006342 GO-bp
Annotation by Michelle Graham. GO Biological Process: chromatin silencing
SoyBase N/A ISS
GO:0007018 GO-bp
Annotation by Michelle Graham. GO Biological Process: microtubule-based movement
SoyBase N/A ISS
GO:0051567 GO-bp
Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0003777 GO-mf
Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
KOG0239
KOG
Kinesin (KAR3 subfamily)
JGI ISS
PTHR24115 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24115:SF135 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00225 PFAM
Kinesin motor domain
JGI ISS
PF00307 PFAM
Calponin homology (CH) domain
JGI ISS
UniRef100_G7KTG9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kinesin-like polypeptide n=1 Tax=Medicago truncatula RepID=G7KTG9_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233ECF4 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233ECF4 related cluster n=1 Tax=unknown RepID=UPI000233ECF4
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g31910
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma19g31910
Paralog Evidence Comments
Glyma03g29100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g31910 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g137500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g31910
Coding sequences of Glyma19g31910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g31910.2 sequence type=CDS gene model=Glyma19g31910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGATGGTTCAAGAAATAGGACTCATTTCAACATGACTTCACGAAAAGCCGAAGAAGCGGCTTGGAGACGCTATGAGGCCACTCAGTGGCTAGAAAGTCAAGTGGGTCCTCTTGGTATATCAAACCAGCCTACTGAGAGAGAACTGATTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAGGTTGTGGTTGTGGACAATCAAGTGCCTTCACAATCACTTACCTGGGATTCACAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTACGCAATTTTCTGTTTGCGATGGAAGAATTAAAGCTTCCAGCTTTTGAAGCTGCTGATCTTGAAAAGGATAATCTCGAGATGGGATCGGCAGCAAAAGTGGTTGATTGCATTTTGGCACTTAAATCGTTTCAAGAGTTGAAGCAGATGAACAATCAGAATGGATACATCAAACACATAAAATCTCCTTTGCCTATGAGAATGCATACAAGAGCAGCTGCGTTCTCCTCTGATGCTTGTAGGCACTTGGATTTGTCTTCCAAATTGGAAAAAATGCCTCCCGCTGAGTGTAATTTTCCGAAAAGAGAAGAAATTGTGGAATTACTTGCCAAGCAACTGGTTGACCGTATGTTTGATGCCAAAGAAAATATCGATGGAAACATTATTGCTTCTCTCCGTAAAGAACACCTGGTAGCGGATCCAATAAAGGTATTTAATCAGATAATGGCATGTTGTAATGGGGAACAGCCACCTACAAAGTTCAATGAGTTGCCATTGCTTCCAAAGGATTCTGCAAAAGAAAAGGATAACTTACCACCTCATTCCACTTCAACACCTATGCAATCAGATGCTTTATCTGCTCCTGACAGTTCTAAGCATTGCCAAGCTTGCCCCAGAAAGTGCAAGTGCAATCAGGTGCATCTTTTAGACAGGCAGGAAAAAGAACTACTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGAGTTTGAAGAGATGCAGTCACAGTTTCAAGGATTTTTTAATGATATTGGGAGTCAAATACAGGAGATGTCAACTAAAGCTCTTGGATATCACAAAGTAGTAGAAGAGAATAGGAAACTATACAACATGGTTCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCCGGGCTGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGATGGTTATCTATTCATTTTAGATCCAACAAAAACACTAAAAGATGGAAGGAAAGTATTTCAGTTTAATCGGGTTTTTGGTCCAACAGCTGACCAAGATGAGGTTTATAAGGATACTCAACCATTAATTAGATCTGTGATGGATGGGTACAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCGGGGAAGACTTACACCATGAGTGGTCCTTCAGGTGGAGTGACATCAAAGGATATGGGAATCAATTATCTGGCACTACATGATTTGTTTCAAATGTCTAATGAAAGGAAGGACATCATAAGCTATGATATTTATGTCCAAATGGTTGAGATTTACAATGAACAAGTTAGAGACTTACTTGCAGAGGACAAAACAGACAACAAATATCCTTTTCATAGGGTCAAACATTTTCACACTACTCATAAGAGATTAGGAAGAGAAAAAATCCGGAGCTGCAATGATGACGGGTTGAGCCTTCCTGATGCTAGATTGCATTTGGTGAAGTCTCCAACTGATGTTCTGACCCTCATGAAACTTGGTGAGGTTAATCGTGCCGTCAGTTCGACTTCAATGAACAATAGGAGTAGTCGATCTCACAGTGTACTTACTGTGCATGTTAATGGTAAAGATACATCTGGGAGCTCCATTCGCAGCTGCTTGCACTTAGTAGACCTAGCTGGAAGTGAACGAGTTGACAAGTCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTATAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCATTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGCGGGTTTCCACTGTGGAACTGGGGGCAGCCCGTATGAACAAAGAAAGCAGCGAGGTTATGCATCTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAACCAAGGAAGCTCAGAGAGTAATGCTCCAAAGAATTAAAGAACCACACACTCCATTAGAGAAGCCAACACTGGTGTCTGAGAAAACTCCATTGCGCCCACGAAGACTTAGCATTGAGAACTGCAGCGCTGTAAAGACTGATAAATCTGTGAATCATGAGGATAGAAGTGGAGCCAAATCACCACTTTTGTTACCTCGTTCGAGAAGATTAAGTTTGGAAGGAGGTTCAAAAACTATCAAGAAAGATAGTCTACTACCAAAAGTATCAGATGATACAGTAAGCAAAGCTTTACAGTACGAGTCAGTGTCTCGACAGAAATATCACCCAATGCAAGATCCAGAATCAGTATCAAAACTAAACGGCCATTTCAGCAGTGGCAATTCCAGGTCAGAGTTGCATACCAGAACCCCTCGAAGTCCTACAAGCATTTCCTATCAAACGAGATTGATAAAAGTAAAAGGTGGGATGCAAGTTCATCCTCTTAAACTGCCTCAAACACCTGAACCACCAGTGCTGGATGGAAATGATGCACATGGCACGAAGGTGATGGGTAGCACAAATGGAAAAGGATCCCAGATAAGAAAATCCTTGAGAACAATTGGGAAACTGATAAATGGCCCTGATAAGAGGAGCCAACAAAATAATATGGTTGAAGTCAAGTCACCCATCAAGGGCACTGGTCATACAAATCATGTAAAATCACCAATTTCAGCTGCTGAGAAAACTAAAAAGAGGCAATCTCTAACGGGGACTCAACCACCACTGTCAAATAACTCCCGTAGATCTTCACTTGGAGGGAAGCCAGTAGTAGCATATGACAAGGACGGAAATGCTAGAACTCCTCCTTCCCATTCAGACACCAAGACTGCAAAACGGTGGCTGTAG
Predicted protein sequences of Glyma19g31910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g31910.2 sequence type=predicted peptide gene model=Glyma19g31910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEDGSRNRTHFNMTSRKAEEAAWRRYEATQWLESQVGPLGISNQPTERELISCLRNGLILCNAINKIHPGAVPKVVVVDNQVPSQSLTWDSQPLPAYQYFENVRNFLFAMEELKLPAFEAADLEKDNLEMGSAAKVVDCILALKSFQELKQMNNQNGYIKHIKSPLPMRMHTRAAAFSSDACRHLDLSSKLEKMPPAECNFPKREEIVELLAKQLVDRMFDAKENIDGNIIASLRKEHLVADPIKVFNQIMACCNGEQPPTKFNELPLLPKDSAKEKDNLPPHSTSTPMQSDALSAPDSSKHCQACPRKCKCNQVHLLDRQEKELLDLKALKLKIKKEFEEMQSQFQGFFNDIGSQIQEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPSFRAESKNVVDFIGEDGYLFILDPTKTLKDGRKVFQFNRVFGPTADQDEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGVTSKDMGINYLALHDLFQMSNERKDIISYDIYVQMVEIYNEQVRDLLAEDKTDNKYPFHRVKHFHTTHKRLGREKIRSCNDDGLSLPDARLHLVKSPTDVLTLMKLGEVNRAVSSTSMNNRSSRSHSVLTVHVNGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARMNKESSEVMHLKEQVENLKIALATKEAQRVMLQRIKEPHTPLEKPTLVSEKTPLRPRRLSIENCSAVKTDKSVNHEDRSGAKSPLLLPRSRRLSLEGGSKTIKKDSLLPKVSDDTVSKALQYESVSRQKYHPMQDPESVSKLNGHFSSGNSRSELHTRTPRSPTSISYQTRLIKVKGGMQVHPLKLPQTPEPPVLDGNDAHGTKVMGSTNGKGSQIRKSLRTIGKLINGPDKRSQQNNMVEVKSPIKGTGHTNHVKSPISAAEKTKKRQSLTGTQPPLSNNSRRSSLGGKPVVAYDKDGNARTPPSHSDTKTAKRWL*