Report for Sequence Feature Glyma19g30090
Feature Type: gene_model
Chromosome: Gm19
Start: 37761973
stop: 37766979
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g30090
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G40980 AT
Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr2:17102090-17104443 FORWARD LENGTH=617
SoyBase E_val: 0 ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
UniRef100_I1N8I1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N8I1_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9SLM4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein kinase family protein n=1 Tax=Arabidopsis thaliana RepID=Q9SLM4_ARATH
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g30090
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma19g30090
Paralog Evidence Comments
Glyma03g00680 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g30090 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g121400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g30090
Coding sequences of Glyma19g30090
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g30090.1 sequence type=CDS gene model=Glyma19g30090 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCAAGGTAGATCCCCAGACCAGGAATCAGTAGGGTCTGGCACAAAGAGGTCCAGTGTATCATCTGGGGGTAGGCCTCAGAATCAGAAGGAGTTCTTCTATAAATTTGTTGAAAGTGACAGCTTGACTGCAAAACTTGTAGATTGGTTTGAATCTGTAACAGAAAATAGTGAATTGAAACAGCAGGCATTTGATGTTCCATTTGAGTTGATTGAACTTCAAAAATTTGATTATGCATTGGAAGGAATTTCATTTCAGCAGCTAACACGCATGCCCAATGCTGTTCATGCTTCTACATCTGATGCTGTAGAAGCAACAGCTTATCTTGCTATTGAAGATTTTCTACATGCAAGTATAAAAGGCTTGTGGGAGGCATTTTGGAGTCAAGATGAGCCCATGCCTTTTTCTGTCGCTTGTCTGTATAATGCCAATATGAAGTTTTATCAGGCTGAAAAGGCAATTGCAAATGGAAGGCTTGGAGGTCTTTGTGGCACTGGTATATTGCTGAATAATCCTAGACATCCTCATGGAAAATGGGATCATGTCCTTGAATTGGCACTGCTAAGACCTGATATTGGAGGCCATGCTGTTGGCAGTGACCGCCAGCCTTCTCCATCAGTTCTTGGAGAGGCTCTATTTTGTGCTCTTCGAATGCTATTGGCAAGGAGTTTAAGTAGACTGAGTTTCTTTCCAGATCCAAGCACAGTGTTTGTTCTTCTTGTTGATTCTCAATATGGGGGAGTTGTAAAGGTTGAAGGAGATGTAAATAAGCTCAATTTTGATGTGAATAATGTTTATGAATGTGCTGCAGAATGGGTAAAAGATCATTCTAGAATTTCTGTTTCTCCAATTGATAGGATCTGGAACAAACTTGGAAATGCAAACTGGGGAGATATTGGTGCTCTTCAGGTACTATTTGCAACCTTCCACTGTATTATGCAATATGCTGGAATGCCCAAACACTCTGTTGAGGATTTAGCTGCTGACCATAGTTCACGCCTCCAAACAAGAAGAGTTGAGAGGCAGTTAGGAGATACAGGTGTAAATGGAAATGGCCTATTGCGATACCAGCAATGTAGTGTTTCCCCTGAAATTGTTGAAGTTCAGGATGATTCTGTCAAAGTTGATTCCAAAGAGTCAATGATAACAGAAGGAACCATATTATGGCTGGAGGATTCAGATTGGCAAAAGGGTTATCAGATAAAAGAGGTAATCAACACTAGTGAGTTGACATACTTCATTGCATCCCATGTTGAAGAGCCAGGAAAAAATCTGTTCCTATATGTAGGCTCTCATCCATCCCAGCTGGAACCAGCATGGGAAGATATGAATTTATGGTATCAAGTTCAGAGGCAGACCAAAGTATTGACAATAATGAAGCAAAAAGGTCTATCAAGCAAATATCTGCCTCGATTGAGTGCCTCTGGTAGGATCATACACCCAGGTCATTGTCGCCGGCCCAGCTCTGGTGGAAATTGTGACCACCCTTGGTGTGGGACCCCTATTCTTGTGACCAGCCCAGTTGGTGAAACAGTAGCTGAAATGGTACGCACAGGGCAATTTGGTTCAGATGAAGCTATCAGATGTTGCCATGATTGCTTATCAGCGCTTTCAACTGTTGCTTCTGCTGGAATTCGGCATGGAGACATCAGGCCAGAGAATGTGATCTGTGTAAAGTCTGGTGTGAGGCACCCTTATTTTGTTCTAATTGGATGGGGCCATGCCATTCTTGAAGATAGGGATCGCCCTGCCATGAATCTTCATTTCTCATCTACTTATGCACTTCAGGAAGGAAAGCTATGCTCTGCTTCAGATGCGGAAAGCCTAGTTTATATGCTTTATTATTCATGTGGTGGAGTTTTCCCTGATTTAGATTCAGTAGAGGGAGCACTACAGTGGAGAGAGACATCTTGGTCAAGGAGATTAATTCAGCAGAAGCTTGGTGATATCTCCACTGTGCTGAAAGCTTTTGCTGATTATGTTGACAGTCTCTGTGGGACACCATATCCCATTGACTATGACATATGGCTGAGAAGGTTGAGGCGAAGTATTCATGAAGATGATCATGGAAAGGAAATCGATGTAACAGGCTAG
Predicted protein sequences of Glyma19g30090
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g30090.1 sequence type=predicted peptide gene model=Glyma19g30090 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MQGRSPDQESVGSGTKRSSVSSGGRPQNQKEFFYKFVESDSLTAKLVDWFESVTENSELKQQAFDVPFELIELQKFDYALEGISFQQLTRMPNAVHASTSDAVEATAYLAIEDFLHASIKGLWEAFWSQDEPMPFSVACLYNANMKFYQAEKAIANGRLGGLCGTGILLNNPRHPHGKWDHVLELALLRPDIGGHAVGSDRQPSPSVLGEALFCALRMLLARSLSRLSFFPDPSTVFVLLVDSQYGGVVKVEGDVNKLNFDVNNVYECAAEWVKDHSRISVSPIDRIWNKLGNANWGDIGALQVLFATFHCIMQYAGMPKHSVEDLAADHSSRLQTRRVERQLGDTGVNGNGLLRYQQCSVSPEIVEVQDDSVKVDSKESMITEGTILWLEDSDWQKGYQIKEVINTSELTYFIASHVEEPGKNLFLYVGSHPSQLEPAWEDMNLWYQVQRQTKVLTIMKQKGLSSKYLPRLSASGRIIHPGHCRRPSSGGNCDHPWCGTPILVTSPVGETVAEMVRTGQFGSDEAIRCCHDCLSALSTVASAGIRHGDIRPENVICVKSGVRHPYFVLIGWGHAILEDRDRPAMNLHFSSTYALQEGKLCSASDAESLVYMLYYSCGGVFPDLDSVEGALQWRETSWSRRLIQQKLGDISTVLKAFADYVDSLCGTPYPIDYDIWLRRLRRSIHEDDHGKEIDVTG*