Report for Sequence Feature Glyma19g28110
Feature Type: gene_model
Chromosome: Gm19
Start: 35462944
stop: 35468045
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g28110
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G02050 AT
Annotation by Michelle Graham. TAIR10: K+ uptake transporter 3 | chr3:350815-354135 FORWARD LENGTH=789
SoyBase E_val: 0 ISS
GO:0006813 GO-bp
Annotation by Michelle Graham. GO Biological Process: potassium ion transport
SoyBase N/A ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0019375 GO-bp
Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process
SoyBase N/A ISS
GO:0019761 GO-bp
Annotation by Michelle Graham. GO Biological Process: glucosinolate biosynthetic process
SoyBase N/A ISS
GO:0071805 GO-bp
Annotation by Michelle Graham. GO Biological Process: potassium ion transmembrane transport
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0015079 GO-mf
Annotation by Michelle Graham. GO Molecular Function: potassium ion transmembrane transporter activity
SoyBase N/A ISS
PF02705 PFAM
K+ potassium transporter
JGI ISS
UniRef100_B9RGU8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1N836 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N836_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g28110
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma19g28110
Paralog Evidence Comments
Glyma16g05060 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g28110 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g105900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g28110
Coding sequences of Glyma19g28110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g28110.1 sequence type=CDS gene model=Glyma19g28110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAACCGGAATCCGGAACTTCCACTTCTCGGAATCCTTCGCAGTTGTCATGGGTGAATCTGTCTAGAAATCTGTTATTAGCGTATCAAAGCTTTGGTGTGGTGTATGGAGATCTGAGCACTTCACCTCTCTATGTCTTCACAAGCACCTTCAGGGGGAAGTTGCAGAATCATCATGATGAAGAAACTATATTCGGCACGTTTTCGTTGATTTTTTGGACCCTTACCTTGATTCCATTGCTTAAATATGTATTCATCCTATTGGGTGCTGATGACAACGGGGAAGGTGGAACATTTGCTCTTTATTCGCTGCTGTGTAGGCATGCCAAGTTTAATTTACTCCCCAATCAACAAGCAGCTGATGAGGAGTTGTCATCCTATAAATATGGTCCCTCTTCACAGGCTGTAGCCTCTTCTCCATTGAAGAGGTTTCTAGAGAAGCATAAAAGGTTAAGAACAGCCCTGCTTATTGTGGTATTGTTTGGTGCTTGCATGGTTGTTGGTGATGGTGTGCTCACTCCAGCAATTTCAGTTCTAGCATCAGTATCAGGACTAAAAGTTACAGAAAAAAAATTAACAGATGATGAACTTGTCTTGCTTGCCTGCGTCATATTGGTTGGACTGTTTGCTCTCCAACATTGTGGCACACACAAAGTTGCATTTATGTTTGCACCTATTGTAATCATCTGGCTTGTATCAATATTTTCTATTGGGTTGTATAATACAATTTATTGGAATCCAAAAATAGTCCGTGCTATATCTCCATATTATATCATTAAGTTTTTTAGCAAGACTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATACTTCTTTGTATCACTGGAACTGAAGCTATGTTTGCGGATCTTGGTCATTTCACTGCTTTGTCAATAAGGCTTGCGTTTGCGTTTGTTATATACCCGTGTTTGGTGGTACAGTACATGGGTCAAGCTGCTTTCTTGTCTAAAAACCTCGGCTCTGTTGCTAACAGTTTTTATGACTCAATACCTGACCCTGTGTTTTGGCCTGTTTTTGTCATTGCCACCCTTGCTGCAATTGTTGGGAGTCAAGCTGTTATAACTGCAACTTTCTCCATCATCAAACAGTGTCATGCGCTTGGTTGCTTTCCACGAGTCAAAGTTGTTCACACCTCGAAACATATATATGGGCAGATCTATATCCCAGAAATCAATTGGATACTTATGATCCTAACTCTTGCTATAACCATTGGATTTCAGGACACCACCATAATTGGAAATGCTTATGGGCTCGCTTGTATGACAGTTATGTTCATAACTACATTTCTGATGACACTAGTCGCAATCTTTGTCTGGCAGAAAAGTGTCTTGATTGCTGTAGTATTTCTTTTATTCTTTTGGGTGATAGAGGGTGTATATCTATCAGCAGCATTCATCAAAGTGCCTCAGGGTGGATGGGTTCCTCTAGTCTTATCATTCATCTTCATGATTGTTATGTACGTGTGGCATTATGGAACTCGTAGGAAGTACAGCTATGATCTGCACAACAAAGTTTCATTGAAATGGTTACTGGGCTTGGGCCCAAGCCTTGGCATTGTTCGTGTCCCGGGGATTGGTCTCATCTACACTGAACTAGCAACAGGAATACCTGCAATATTTTCCCATTTTGTAACAAATCTTCCTGCATTTCACAAGGTGTTGGTTTTTGTTTGTGTAAAATCAGTTCCTGTTCCGTATGTTTCACCTAAAGAGCGTTTCCTTATTGGCCGAGTTTGTCCCAGACCATATCGAATGTATAGGTGCATTGTCAGATATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAACCATCTTATACAGAGTATAGCAGAATTTATCCAAATGGAAGCAGTGCAACCCCAGTTCTCAAGTTCTGAAGCTTCATCTTCCCTTGATGGGAGGATGGCTGTTATAAGTTCTAGAAACTATGATTATGCTTCAAGTTTAGTAGTTTCTGAGCACGAGGATATTGGCGTTGACATGTCCGTTCCTAGCAGCAGATCTGCAACCCTGCAAAGTTTGCAATCGGTTTACAATGATGATACTCCACAAGTTAGAAGGCGACGAGTAAGATTTCAGCTACCAGAAAATCCTGGTATGGATCCCGATGTTAGGGAAGAGCTTTTGGATTTAATTCAAGCCAAGGAAGCTGGGGTTGCATATATAATGGGGCACTCGTATGTGAAAGCAAGAAAATCATCCTCATTCTTGAAAAAGCTTGTGATTGATATTGGCTACTCATTTCTGCGCAAGAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATTAGTCTTATTGAAGTTGGGATGATATATTATGTGTAG
Predicted protein sequences of Glyma19g28110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g28110.1 sequence type=predicted peptide gene model=Glyma19g28110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEPESGTSTSRNPSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVFTSTFRGKLQNHHDEETIFGTFSLIFWTLTLIPLLKYVFILLGADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAVASSPLKRFLEKHKRLRTALLIVVLFGACMVVGDGVLTPAISVLASVSGLKVTEKKLTDDELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSIGLYNTIYWNPKIVRAISPYYIIKFFSKTGKEGWVSLGGILLCITGTEAMFADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLGSVANSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFITTFLMTLVAIFVWQKSVLIAVVFLLFFWVIEGVYLSAAFIKVPQGGWVPLVLSFIFMIVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPKERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVQPQFSSSEASSSLDGRMAVISSRNYDYASSLVVSEHEDIGVDMSVPSSRSATLQSLQSVYNDDTPQVRRRRVRFQLPENPGMDPDVREELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV*