SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G07920 | AT | Annotation by Michelle Graham. TAIR10: diacylglycerol kinase1 | chr5:2525197-2528396 REVERSE LENGTH=728 | SoyBase | E_val: 1.00E-88 | ISS |
| GO:0007205 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein kinase C-activating G-protein coupled receptor signaling pathway | SoyBase | N/A | ISS |
| GO:0035556 | GO-bp | Annotation by Michelle Graham. GO Biological Process: intracellular signal transduction | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0004143 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: diacylglycerol kinase activity | SoyBase | N/A | ISS |
| GO:0005509 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: calcium ion binding | SoyBase | N/A | ISS |
| PTHR11255 | Panther | DIACYLGLYCEROL KINASE | JGI | ISS | |
| PTHR11255:SF33 | Panther | JGI | ISS | ||
| PF00781 | PFAM | Diacylglycerol kinase catalytic domain | JGI | ISS | |
| UniRef100_B9RLR5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Diacylglycerol kinase, theta, putative n=1 Tax=Ricinus communis RepID=B9RLR5_RICCO | SoyBase | E_val: 2.00E-95 | ISS |
| UniRef100_I1MT53 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MT53_SOYBN | SoyBase | E_val: 2.33E-156 | ISS |
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Glyma19g22820 not represented in the dataset |
Glyma19g22820 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g22820.1 sequence type=CDS gene model=Glyma19g22820 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high AGAAGCTCTAACAGAATTACTGGTGAATATGGGAATAGTGAGAGCATTGGTGAGGTGTCCACAGAAAGCACTGGTGATTCTCATCAAATACAAAATGATCATCATGAAGTGGGTGAAAAAAGTAGCTCGAATAAGGAGGTTCGACATCAAGATAGTGAAGTAGATAATAAGTTGGATAGAAAACCCACTCTTAGACGCAATTCATTAATCAATCAGAAGGATGAATCCCACTCATTAGGAGTGAAGCAGAAATATGATTTGATTGATTTGCCTCTGGATGCAAGACCATTGTTAGTTTTTATAAACAACAAGAGTGATGCCCAGCGTGGAGACTCAGTTAGAATGTGGCTGAATATCCTTTTATATGCTATTCAGGTGATTGAATTAAGTTCAACACAGGGGCTAGAGATGGGACTTTATTTGTTTAGAATGGTGTCTCACTTCAGAGTTCTTGTATGTGGAGGAGATGGTACTGTTGGTTGGGTTCTGAATGCAATAGACAAGCAAAATTTTGTTTCTCTTCCCCCAGTTGCTATTCTTCCTGCTAGTATAGGAAATGATCTTGCAAGAGTTCTCTCCTGGGGAGGTGACTTGGGTCCAGTGGAGAGGCAAGCGGGTCTTACTACATTTTTGCAACACATAGAATATGCTGTTGTTATGGTTCTTGACCATTGGAAGGTAACAATTAGTAATCCACAAGGAAAGCAACAGCTGCAACCAACAAAGTTTTTGAACAATTATCTT
>Glyma19g22820.1 sequence type=predicted peptide gene model=Glyma19g22820 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high RSSNRITGEYGNSESIGEVSTESTGDSHQIQNDHHEVGEKSSSNKEVRHQDSEVDNKLDRKPTLRRNSLINQKDESHSLGVKQKYDLIDLPLDARPLLVFINNKSDAQRGDSVRMWLNILLYAIQVIELSSTQGLEMGLYLFRMVSHFRVLVCGGDGTVGWVLNAIDKQNFVSLPPVAILPASIGNDLARVLSWGGDLGPVERQAGLTTFLQHIEYAVVMVLDHWKVTISNPQGKQQLQPTKFLNNYL
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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