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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G40760 | AT | Annotation by Michelle Graham. TAIR10: glucose-6-phosphate dehydrogenase 6 | chr5:16311284-16314556 FORWARD LENGTH=515 | SoyBase | E_val: 0 | ISS |
| GO:0006006 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glucose metabolic process | SoyBase | N/A | ISS |
| GO:0009051 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pentose-phosphate shunt, oxidative branch | SoyBase | N/A | ISS |
| GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
| GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
| GO:0004345 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: glucose-6-phosphate dehydrogenase activity | SoyBase | N/A | ISS |
| GO:0050661 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NADP binding | SoyBase | N/A | ISS |
| KOG0563 | KOG | Glucose-6-phosphate 1-dehydrogenase | JGI | ISS | |
| PTHR23429 | Panther | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE (G6PD) | JGI | ISS | |
| PF00479 | PFAM | Glucose-6-phosphate dehydrogenase, NAD binding domain | JGI | ISS | |
| PF02781 | PFAM | Glucose-6-phosphate dehydrogenase, C-terminal domain | JGI | ISS | |
| UniRef100_I1N7G1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Glycine max RepID=I1N7G1_SOYBN | SoyBase | E_val: 0 | ISS |
| UniRef100_I1N7G1 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Glycine max RepID=I1N7G1_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma19g22690 not represented in the dataset |
Glyma19g22690 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.19g077300 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g22690.2 sequence type=transcript gene model=Glyma19g22690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TGAATGAAATTGCAGTTGCCACCTGTCACTTGAGACAACAGCATTTGTGGATATGTTTATGTCTTATTCACGATTGAACGATTGATTTAACCGGGGAAAGTCGTTGAACGATAACGAGGGTACTGTTCCATTATCCTAAAAAAGAAGAAATCCACTGAGAGTGGTCGTGTTCAGAAATCAATCAAGGGTTATATTTGTTTGCTACTGATAAAGGATGACATCAAGTGAATGGCGTGTTGAAAGAAGGCAAAGCTCAACTAATGAATCCCCTCTATCGAGGGATCTAGAACATGCAACTGAAACTGGGTCACTCTCCATTGTTGTGCTTGGTGCTTCTGGTGACCTTGCTAAGAAGAAGACATTTCCAGCACTTTTCAACCTATACCGTCAGGGATTCCTACTACCAGATGAGGTTTGTATTTTTGGCTATGCTAGGTCAAAACTCACTGATGACGAGTTGAGAAACCGCTTACATGGCTATCTTGTTCCAAGCAAAGATTTTTCCCCTGAGCAGTTGGAGGAAGTATCAAAGTTCTTGCATCTGATCAAATATGTAAGCGGCTCTTATGATTCTGAGGACAGTTTCTGTAATTTGGATAAAGAGATTTCAGAGCATGAACTTTTGAAAAACAGTACTGAGGGTTCTTCTCGAAGGCTTTTCTATCTTGCCCTTCCTCCTTCAGTATATCCATCAGTTTGCAAGATGATCAAGACTTGTTGCATGAATAAATCTGATCTTGGTGGGTGGACACGTATTGTTGTTGAGAAGCCTTTTGGTAAGGATCTGGAATCTGCAGAGCAACTCAGTACCCAGATTGGACAGTTGTTTGAAGAACCCCAGATTTATCGAATTGATCACTACTTAGGAAAGGAACTTGTGCAGAATATGTTAGTACTTCGTTTTGCAAACCGATTATTCATGCCTCTATGGAACCGTGACAACATTGCTAATGTGCAGATCGTTTTCAGAGAAAATTTTGGAACTGAAGGTCGAGGTGGATATTTTGACCAGTATGGAATTATTCGAGATATAATTCAAAATCATCTGCTACAGGTTTTTTGCTTGGTTGCTATGGAAAAACCAGTTTCTCTCAAGCCTGAGCACATTCGGGATGAGAAACTGAAGGTTCTTGAATCAGTACTTCCTATTAAAGATGATGAGGTTGTTCTAGGACAATATGAAGGCTATAAAGATGATCCAACTGTGCCTGACAATTCAAACACTCCTACTTTTGCAACTGTTATTCTGCGAGTACACAATGAAAGATGGGAGGGTGTTCCTTTCATACTAAAGGCTGGGAAGGCCTTAAATTCGAGAAAGGCAGACATACGGGTTCAATTCAAGGATGTTCCTGGTGATATTTTTAAGTGTCAAAAGCAGGGGAGAAATGAGTTTGTTATACGCCTGCAACCTTCAGAAGCTATGTACATGAAGCTTACAGTCAAGAAACCTGGACTGGAGATGGAAACAGTTCAAAGTGAACTAGATTTGTCTTATAGGCAACGCTATCAAGCAGTAACCATTCCAGAGGCTTATGAGCGTCTGATTCTTGACTCAATTAGAGGTGATCAACAACATTTTGTTCGCAGAGATGAGTTGAAGGCATCATGGGAGATCTTCACCCCACTTTTGCACCGCATTGATAAGGGGGAGTTCAAGTCAACCCCTTACCAACCTGGAACAAGAGGTCCTGTAGAAGCAGATAAATTACTGCTGGAAAAAGCTGGTTATGTTCAAACACATGGTTATAGATGGATCCCTCCAACATTGTAGAAAGAACAATGTTACACTAGCTTGCACTACCTTAAAATTTGTTGATGCGTGCACTTAATAAGCTTGGGAAAATCCCCTTGGAGCAAGACTCTTCCCTAATGGGTGATTTTATCAAGCATATGAATAAATGTGGTTGACATTGTATATTTAATATTATCTGCCTACGAATGCAGAAGAATAAGTGGTTGACATGGTGCATGTAACGTTATTTGCTTGTGAATAAAGAATAAATGGAAAATAAAAGTTCATTTAGTAGTATTTGTATTCCATTATGCAATAATCTCCAAGATAAATTTGACTCATGTCATTTATGTTATGGTCTATATTCATTGATTC
>Glyma19g22690.1 sequence type=CDS gene model=Glyma19g22690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACATCAAGTGAATGGCGTGTTGAAAGAAGGCAAAGCTCAACTAATGAATCCCCTCTATCGAGGGATCTAGAACATGCAACTGAAACTGGGTCACTCTCCATTGTTGTGCTTGGTGCTTCTGGTGACCTTGCTAAGAAGAAGACATTTCCAGCACTTTTCAACCTATACCGTCAGGGATTCCTACTACCAGATGAGGTTTGTATTTTTGGCTATGCTAGGTCAAAACTCACTGATGACGAGTTGAGAAACCGCTTACATGGCTATCTTGTTCCAAGCAAAGATTTTTCCCCTGAGCAGTTGGAGGAAGTATCAAAGTTCTTGCATCTGATCAAATATGTAAGCGGCTCTTATGATTCTGAGGACAGTTTCTGTAATTTGGATAAAGAGATTTCAGAGCATGAACTTTTGAAAAACAGTACTGAGGGTTCTTCTCGAAGGCTTTTCTATCTTGCCCTTCCTCCTTCAGTATATCCATCAGTTTGCAAGATGATCAAGACTTGTTGCATGAATAAATCTGATCTTGGTGGGTGGACACGTATTGTTGTTGAGAAGCCTTTTGGTAAGGATCTGGAATCTGCAGAGCAACTCAGTACCCAGATTGGACAGTTGTTTGAAGAACCCCAGATTTATCGAATTGATCACTACTTAGGAAAGGAACTTGTGCAGAATATGTTAGTACTTCGTTTTGCAAACCGATTATTCATGCCTCTATGGAACCGTGACAACATTGCTAATGTGCAGATCGTTTTCAGAGAAAATTTTGGAACTGAAGGTCGAGGTGGATATTTTGACCAGTATGGAATTATTCGAGATATAATTCAAAATCATCTGCTACAGGTTTTTTGCTTGGTTGCTATGGAAAAACCAGTTTCTCTCAAGCCTGAGCACATTCGGGATGAGAAACTGAAGGTTCTTGAATCAGTACTTCCTATTAAAGATGATGAGGTTGTTCTAGGACAATATGAAGGCTATAAAGATGATCCAACTGTGCCTGACAATTCAAACACTCCTACTTTTGCAACTGTTATTCTGCGAGTACACAATGAAAGATGGGAGGGTGTTCCTTTCATACTAAAGGCTGGGAAGGCCTTAAATTCGAGAAAGGCAGACATACGGGTTCAATTCAAGGATGTTCCTGGTGATATTTTTAAGTGTCAAAAGCAGGGGAGAAATGAGTTTGTTATACGCCTGCAACCTTCAGAAGCTATGTACATGAAGCTTACAGTCAAGAAACCTGGACTGGAGATGGAAACAGTTCAAAGTGAACTAGATTTGTCTTATAGGCAACGCTATCAAGCAGTAACCATTCCAGAGGCTTATGAGCGTCTGATTCTTGACTCAATTAGAGGTGATCAACAACATTTTGTTCGCAGAGATGAGTTGAAGGCATCATGGGAGATCTTCACCCCACTTTTGCACCGCATTGATAAGGGGGAGTTCAAGTCAACCCCTTACCAACCTGGAACAAGAGGTCCTGTAGAAGCAGATAAATTACTGCTGGAAAAAGCTGGTTATGTTCAAACACATGGTTATAGATGGATCCCTCCAACATTGTAG >Glyma19g22690.2 sequence type=CDS gene model=Glyma19g22690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACATCAAGTGAATGGCGTGTTGAAAGAAGGCAAAGCTCAACTAATGAATCCCCTCTATCGAGGGATCTAGAACATGCAACTGAAACTGGGTCACTCTCCATTGTTGTGCTTGGTGCTTCTGGTGACCTTGCTAAGAAGAAGACATTTCCAGCACTTTTCAACCTATACCGTCAGGGATTCCTACTACCAGATGAGGTTTGTATTTTTGGCTATGCTAGGTCAAAACTCACTGATGACGAGTTGAGAAACCGCTTACATGGCTATCTTGTTCCAAGCAAAGATTTTTCCCCTGAGCAGTTGGAGGAAGTATCAAAGTTCTTGCATCTGATCAAATATGTAAGCGGCTCTTATGATTCTGAGGACAGTTTCTGTAATTTGGATAAAGAGATTTCAGAGCATGAACTTTTGAAAAACAGTACTGAGGGTTCTTCTCGAAGGCTTTTCTATCTTGCCCTTCCTCCTTCAGTATATCCATCAGTTTGCAAGATGATCAAGACTTGTTGCATGAATAAATCTGATCTTGGTGGGTGGACACGTATTGTTGTTGAGAAGCCTTTTGGTAAGGATCTGGAATCTGCAGAGCAACTCAGTACCCAGATTGGACAGTTGTTTGAAGAACCCCAGATTTATCGAATTGATCACTACTTAGGAAAGGAACTTGTGCAGAATATGTTAGTACTTCGTTTTGCAAACCGATTATTCATGCCTCTATGGAACCGTGACAACATTGCTAATGTGCAGATCGTTTTCAGAGAAAATTTTGGAACTGAAGGTCGAGGTGGATATTTTGACCAGTATGGAATTATTCGAGATATAATTCAAAATCATCTGCTACAGGTTTTTTGCTTGGTTGCTATGGAAAAACCAGTTTCTCTCAAGCCTGAGCACATTCGGGATGAGAAACTGAAGGTTCTTGAATCAGTACTTCCTATTAAAGATGATGAGGTTGTTCTAGGACAATATGAAGGCTATAAAGATGATCCAACTGTGCCTGACAATTCAAACACTCCTACTTTTGCAACTGTTATTCTGCGAGTACACAATGAAAGATGGGAGGGTGTTCCTTTCATACTAAAGGCTGGGAAGGCCTTAAATTCGAGAAAGGCAGACATACGGGTTCAATTCAAGGATGTTCCTGGTGATATTTTTAAGTGTCAAAAGCAGGGGAGAAATGAGTTTGTTATACGCCTGCAACCTTCAGAAGCTATGTACATGAAGCTTACAGTCAAGAAACCTGGACTGGAGATGGAAACAGTTCAAAGTGAACTAGATTTGTCTTATAGGCAACGCTATCAAGCAGTAACCATTCCAGAGGCTTATGAGCGTCTGATTCTTGACTCAATTAGAGGTGATCAACAACATTTTGTTCGCAGAGATGAGTTGAAGGCATCATGGGAGATCTTCACCCCACTTTTGCACCGCATTGATAAGGGGGAGTTCAAGTCAACCCCTTACCAACCTGGAACAAGAGGTCCTGTAGAAGCAGATAAATTACTGCTGGAAAAAGCTGGTTATGTTCAAACACATGGTTATAGATGGATCCCTCCAACATTGTAG
>Glyma19g22690.1 sequence type=predicted peptide gene model=Glyma19g22690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTSSEWRVERRQSSTNESPLSRDLEHATETGSLSIVVLGASGDLAKKKTFPALFNLYRQGFLLPDEVCIFGYARSKLTDDELRNRLHGYLVPSKDFSPEQLEEVSKFLHLIKYVSGSYDSEDSFCNLDKEISEHELLKNSTEGSSRRLFYLALPPSVYPSVCKMIKTCCMNKSDLGGWTRIVVEKPFGKDLESAEQLSTQIGQLFEEPQIYRIDHYLGKELVQNMLVLRFANRLFMPLWNRDNIANVQIVFRENFGTEGRGGYFDQYGIIRDIIQNHLLQVFCLVAMEKPVSLKPEHIRDEKLKVLESVLPIKDDEVVLGQYEGYKDDPTVPDNSNTPTFATVILRVHNERWEGVPFILKAGKALNSRKADIRVQFKDVPGDIFKCQKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMETVQSELDLSYRQRYQAVTIPEAYERLILDSIRGDQQHFVRRDELKASWEIFTPLLHRIDKGEFKSTPYQPGTRGPVEADKLLLEKAGYVQTHGYRWIPPTL* >Glyma19g22690.2 sequence type=predicted peptide gene model=Glyma19g22690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTSSEWRVERRQSSTNESPLSRDLEHATETGSLSIVVLGASGDLAKKKTFPALFNLYRQGFLLPDEVCIFGYARSKLTDDELRNRLHGYLVPSKDFSPEQLEEVSKFLHLIKYVSGSYDSEDSFCNLDKEISEHELLKNSTEGSSRRLFYLALPPSVYPSVCKMIKTCCMNKSDLGGWTRIVVEKPFGKDLESAEQLSTQIGQLFEEPQIYRIDHYLGKELVQNMLVLRFANRLFMPLWNRDNIANVQIVFRENFGTEGRGGYFDQYGIIRDIIQNHLLQVFCLVAMEKPVSLKPEHIRDEKLKVLESVLPIKDDEVVLGQYEGYKDDPTVPDNSNTPTFATVILRVHNERWEGVPFILKAGKALNSRKADIRVQFKDVPGDIFKCQKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMETVQSELDLSYRQRYQAVTIPEAYERLILDSIRGDQQHFVRRDELKASWEIFTPLLHRIDKGEFKSTPYQPGTRGPVEADKLLLEKAGYVQTHGYRWIPPTL*
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