SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT3G27820 | AT | Annotation by Michelle Graham. TAIR10: monodehydroascorbate reductase 4 | chr3:10315249-10317881 FORWARD LENGTH=488 | SoyBase | E_val: 0 | ISS |
| GO:0019761 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glucosinolate biosynthetic process | SoyBase | N/A | ISS |
| GO:0042744 | GO-bp | Annotation by Michelle Graham. GO Biological Process: hydrogen peroxide catabolic process | SoyBase | N/A | ISS |
| GO:0046686 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cadmium ion | SoyBase | N/A | ISS |
| GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0005778 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: peroxisomal membrane | SoyBase | N/A | ISS |
| GO:0009941 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope | SoyBase | N/A | ISS |
| GO:0009055 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: electron carrier activity | SoyBase | N/A | ISS |
| GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
| GO:0016656 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: monodehydroascorbate reductase (NADH) activity | SoyBase | N/A | ISS |
| GO:0050660 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: flavin adenine dinucleotide binding | SoyBase | N/A | ISS |
| KOG1336 | KOG | Monodehydroascorbate/ferredoxin reductase | JGI | ISS | |
| PTHR22912 | Panther | DISULFIDE OXIDOREDUCTASE | JGI | ISS | |
| PTHR22912:SF37 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF00070 | PFAM | Pyridine nucleotide-disulphide oxidoreductase | JGI | ISS | |
| PF07992 | PFAM | Pyridine nucleotide-disulphide oxidoreductase | JGI | ISS | |
| UniRef100_B9S635 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Monodehydroascorbate reductase, putative n=1 Tax=Ricinus communis RepID=B9S635_RICCO | SoyBase | E_val: 0 | ISS |
| UniRef100_UPI0001D62E95 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0001D62E95 related cluster n=1 Tax=unknown RepID=UPI0001D62E95 | SoyBase | E_val: 0 | ISS |
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Glyma19g14500 not represented in the dataset |
Glyma19g14500 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.19g061200 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g14500.3 sequence type=transcript gene model=Glyma19g14500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTTGGATAACACACAAAAAAGTTGATGCAGCAATAAAAAAAGAAAAAAAGAAAAAACACAGATAAGTTGGATAACAAAATCACAACGCGAAGACAAGATGAACGGCCACGATGCGATAACATTCTTAAAATGTGTGGAAACAATGGCGTTGCGTATGATGCAGAGGGGGTCTAATTGGGGGCTATAAGGTAAATGCAGGAGCTATCTCCGTCGTCGTGGTTGTGGGTCCCGTTCGTGATCTTCAGATATTGTGGGAGTGTCTTGAAAGAAAGCGCTCCCAAAAAATTGTGCACCCTCGATTATTTGAATTGAAGATAAATAAGAGAATAAGGCGTTGTTTTGTTGTGTTGCGTTGCGTTGCGTTGTGTGGGTGTGAAGCTGGGAAAATGGGGAGAGCCTTTGTGTATGTGATTCTTGGAGGAGGCGTGGCTGCTGGCTATGCTGCTCTTGAATTCGTCAAGAAAGGAGTCTCTCATGGTGAACTGTGTATTATTTCCGATGAACCAGTGGCTCCTTATGAAAGGCCCGCATTGAGCAAAGGATTTTTGCTTCCAGAAGCTGCTGCCCGGCTTCCATCCTTTCATACCTGTGTTGGTGCAAATGAGGAGAGGCTAACTTCAAAATGGTATAAAGAGCATGGGATTGAATTAGTTCTTGGAACTGGAGTTAAATCTGCTGATGTAAAACGTAAGACACTATTAACAACAACCGGAGAGACCATAAGTTACAAGATTCTTATTGTTGCTACCGGTGCTCGGGCTTTGAAGCTGGAAGAATTTGGGGTCACTGGATCAGATGCAGGAAATGTCTGTTATTTAAGAGATATAGCAGATGCAAATAGGCTTGTTGATGTTATGCAATCTTGTCCTGGAGGTAATGCTGTTGTCATTGGTGGTGGATACATAGGCATGGAGTGTGCAGCGTCTTTAGTGATCAATAAAATAAATGTAACAATGGTCTTTCCTGAGGAACATTGCATGGGTCGATTATTTACCTCAAAGATAGCAAACTACTATGAAGAATATTATAAATCAAGAGGAGTAAACTTCATTAAGGGAACTGTGCTGTCATCATTTGATTTTGATTCCAATGGGAAGGTTACAGCTGTTAATCTTAGAGATGGAAGCACACTGTCTGTGGACATGGTTGTGGTAGGAATTGGAATACGTCCAAATACAGGGCTGTTTGAAGGCCAGCTTACTTTGGAGAAAGGTGGAATCAAAGTAAATGGGATGTTGCAGTCAAGCAACAGCTCAGTCTATGCCATTGGAGATGTTGCAGCATTTCCAGTCAAAGCAGTTGGGGAAACACGAAGACTTGAGCATGTTGATTCAGCACGGAAATCTGCGAGACATGTTGTTTCTGCCATAATGGAACCAAACAAAACGAGAGAATTCGATTACCTTCCTTTTTTCTATTCCAGAATCTTCACACTGTCTTGGCAATTTTATGGTGATAATGTTGGGGAAGTTGTCTATTATGGAGATATGTCAGGTAGTACATTTGGAGCATACTGGGTAAGCAAGGATCACCTTGTTGGGGCTTTCCTTGAAGGCGGAACTAAAGAAGAGTATGAAGCCATAGCCAAGGCCACTAGGTTAAGGCCGGTAATTGAAGACTTGACTGAACTTGAGAGACAGGGTTTGAGGTTTGCTGTTACAGTTAGCGAGAAACCGATGGCCTCACCCCCAATTGAGGTTAGGGCCTCAGACCTACTTTTGGAAAAACCATTATATGCTTGGCATGCTACAGCTGGGGTTATTATTGCTGCATCAATAGCTGGATTTGCATATTTTTATGGGAAAAAGCGCCACAGATGGTGAAACTTTAAGAAGATTACCAATTCAGGGTTAAGGGTGTCAACAGATTATAGACAGATCTGCAAGCTGTAACATTGATAAGACTAGGACTAGGATATTTTGACATGTAATTGTATCCTATCCAATTTGCTGGATAACCATTCTTCAATTCTATTGTTCATCCAGGATGTTGTACAAGAAGCAAAATATAAATGGCCATCTTTTGGAAGATATTCCTATAGCAAAAGTCCATGTATCATCTAATATTCCTACATATTCATAAAATATCTTGGTTTTAGTCCTATTT
>Glyma19g14500.2 sequence type=CDS gene model=Glyma19g14500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGGAGAGCCTTTGTGTATGTGATTCTTGGAGGAGGCGTGGCTGCTGGCTATGCTGCTCTTGAATTCGTCAAGAAAGGAGTCTCTCATGGTGAACTGTGTATTATTTCCGATGAACCAGTGGCTCCTTATGAAAGGCCCGCATTGAGCAAAGGATTTTTGCTTCCAGAAGCTGCTGCCCGGCTTCCATCCTTTCATACCTGTGTTGGTGCAAATGAGGAGAGGCTAACTTCAAAATGGTATAAAGAGCATGGGATTGAATTAGTTCTTGGAACTGGAGTTAAATCTGCTGATGTAAAACGTAAGACACTATTAACAACAACCGGAGAGACCATAAGTTACAAGATTCTTATTGTTGCTACCGGTGCTCGGGCTTTGAAGCTGGAAGAATTTGGGGTCACTGGATCAGATGCAGGAAATGTCTGTTATTTAAGAGATATAGCAGATGCAAATAGGCTTGTTGATGTTATGCAATCTTGTCCTGGAGGTAATGCTGTTGTCATTGGTGGTGGATACATAGGCATGGAGTGTGCAGCGTCTTTAGTGATCAATAAAATAAATGTAACAATGGTCTTTCCTGAGGAACATTGCATGGGTCGATTATTTACCTCAAAGATAGCAAACTACTATGAAGAATATTATAAATCAAGAGGAGTAAACTTCATTAAGGGAACTGTGCTGTCATCATTTGATTTTGATTCCAATGGGAAGGTTACAGCTGTTAATCTTAGAGATGGAAGCACACTGTCTGTGGACATGGTTGTGGTAGGAATTGGAATACGTCCAAATACAGGGCTGTTTGAAGGCCAGCTTACTTTGGAGAAAGGTGGAATCAAAGTAAATGGGATGTTGCAGTCAAGCAACAGCTCAGTCTATGCCATTGGAGATGTTGCAGCATTTCCAGTCAAAGCAGTTGGGGAAACACGAAGACTTGAGCATGTTGATTCAGCACGGAAATCTGCGAGACATGTTGTTTCTGCCATAATGGAACCAAACAAAACGAGAGAATTCGATTACCTTCCTTTTTTCTATTCCAGAATCTTCACACTGTCTTGGCAATTTTATGGTGATAATGTTGGGGAAGTTGTCTATTATGGAGATATGTCAGGTAGTACATTTGGAGCATACTGGGTAAGCAAGGATCACCTTGTTGGGGCTTTCCTTGAAGGCGGAACTAAAGAAGAGTATGAAGCCATAGCCAAGGCCACTAGGTTAAGGCCGGTAATTGAAGACTTGACTGAACTTGAGAGACAGGGTTTGAGGTTTGCTGTTACAGTTAGCGAGAAACCGATGGCCTCACCCCCAATTGAGGTTAGGGCCTCAGACCTACTTTTGGAAAAACCATTATATGCTTGGCATGCTACAGCTGGGGTTATTATTGCTGCATCAATAGCTGGATTTGCATATTTTTATGGGAAAAAGCGCCACAGATGGTGA >Glyma19g14500.3 sequence type=CDS gene model=Glyma19g14500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGGAGAGCCTTTGTGTATGTGATTCTTGGAGGAGGCGTGGCTGCTGGCTATGCTGCTCTTGAATTCGTCAAGAAAGGAGTCTCTCATGGTGAACTGTGTATTATTTCCGATGAACCAGTGGCTCCTTATGAAAGGCCCGCATTGAGCAAAGGATTTTTGCTTCCAGAAGCTGCTGCCCGGCTTCCATCCTTTCATACCTGTGTTGGTGCAAATGAGGAGAGGCTAACTTCAAAATGGTATAAAGAGCATGGGATTGAATTAGTTCTTGGAACTGGAGTTAAATCTGCTGATGTAAAACGTAAGACACTATTAACAACAACCGGAGAGACCATAAGTTACAAGATTCTTATTGTTGCTACCGGTGCTCGGGCTTTGAAGCTGGAAGAATTTGGGGTCACTGGATCAGATGCAGGAAATGTCTGTTATTTAAGAGATATAGCAGATGCAAATAGGCTTGTTGATGTTATGCAATCTTGTCCTGGAGGTAATGCTGTTGTCATTGGTGGTGGATACATAGGCATGGAGTGTGCAGCGTCTTTAGTGATCAATAAAATAAATGTAACAATGGTCTTTCCTGAGGAACATTGCATGGGTCGATTATTTACCTCAAAGATAGCAAACTACTATGAAGAATATTATAAATCAAGAGGAGTAAACTTCATTAAGGGAACTGTGCTGTCATCATTTGATTTTGATTCCAATGGGAAGGTTACAGCTGTTAATCTTAGAGATGGAAGCACACTGTCTGTGGACATGGTTGTGGTAGGAATTGGAATACGTCCAAATACAGGGCTGTTTGAAGGCCAGCTTACTTTGGAGAAAGGTGGAATCAAAGTAAATGGGATGTTGCAGTCAAGCAACAGCTCAGTCTATGCCATTGGAGATGTTGCAGCATTTCCAGTCAAAGCAGTTGGGGAAACACGAAGACTTGAGCATGTTGATTCAGCACGGAAATCTGCGAGACATGTTGTTTCTGCCATAATGGAACCAAACAAAACGAGAGAATTCGATTACCTTCCTTTTTTCTATTCCAGAATCTTCACACTGTCTTGGCAATTTTATGGTGATAATGTTGGGGAAGTTGTCTATTATGGAGATATGTCAGGTAGTACATTTGGAGCATACTGGGTAAGCAAGGATCACCTTGTTGGGGCTTTCCTTGAAGGCGGAACTAAAGAAGAGTATGAAGCCATAGCCAAGGCCACTAGGTTAAGGCCGGTAATTGAAGACTTGACTGAACTTGAGAGACAGGGTTTGAGGTTTGCTGTTACAGTTAGCGAGAAACCGATGGCCTCACCCCCAATTGAGGTTAGGGCCTCAGACCTACTTTTGGAAAAACCATTATATGCTTGGCATGCTACAGCTGGGGTTATTATTGCTGCATCAATAGCTGGATTTGCATATTTTTATGGGAAAAAGCGCCACAGATGGTGA
>Glyma19g14500.2 sequence type=predicted peptide gene model=Glyma19g14500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGRAFVYVILGGGVAAGYAALEFVKKGVSHGELCIISDEPVAPYERPALSKGFLLPEAAARLPSFHTCVGANEERLTSKWYKEHGIELVLGTGVKSADVKRKTLLTTTGETISYKILIVATGARALKLEEFGVTGSDAGNVCYLRDIADANRLVDVMQSCPGGNAVVIGGGYIGMECAASLVINKINVTMVFPEEHCMGRLFTSKIANYYEEYYKSRGVNFIKGTVLSSFDFDSNGKVTAVNLRDGSTLSVDMVVVGIGIRPNTGLFEGQLTLEKGGIKVNGMLQSSNSSVYAIGDVAAFPVKAVGETRRLEHVDSARKSARHVVSAIMEPNKTREFDYLPFFYSRIFTLSWQFYGDNVGEVVYYGDMSGSTFGAYWVSKDHLVGAFLEGGTKEEYEAIAKATRLRPVIEDLTELERQGLRFAVTVSEKPMASPPIEVRASDLLLEKPLYAWHATAGVIIAASIAGFAYFYGKKRHRW* >Glyma19g14500.3 sequence type=predicted peptide gene model=Glyma19g14500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGRAFVYVILGGGVAAGYAALEFVKKGVSHGELCIISDEPVAPYERPALSKGFLLPEAAARLPSFHTCVGANEERLTSKWYKEHGIELVLGTGVKSADVKRKTLLTTTGETISYKILIVATGARALKLEEFGVTGSDAGNVCYLRDIADANRLVDVMQSCPGGNAVVIGGGYIGMECAASLVINKINVTMVFPEEHCMGRLFTSKIANYYEEYYKSRGVNFIKGTVLSSFDFDSNGKVTAVNLRDGSTLSVDMVVVGIGIRPNTGLFEGQLTLEKGGIKVNGMLQSSNSSVYAIGDVAAFPVKAVGETRRLEHVDSARKSARHVVSAIMEPNKTREFDYLPFFYSRIFTLSWQFYGDNVGEVVYYGDMSGSTFGAYWVSKDHLVGAFLEGGTKEEYEAIAKATRLRPVIEDLTELERQGLRFAVTVSEKPMASPPIEVRASDLLLEKPLYAWHATAGVIIAASIAGFAYFYGKKRHRW*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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