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Report for Sequence Feature Glyma19g07665

Feature Type:gene_model
Chromosome:Gm19
Start:9173245
stop:9176511
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma19g07665
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G38850AT Annotation by Michelle Graham. TAIR10: Disease resistance protein (TIR-NBS-LRR class) | chr5:15555187-15558430 FORWARD LENGTH=986 SoyBaseE_val: 8.00E-12ISS
GO:0006952GO-bp Annotation by Michelle Graham. GO Biological Process: defense response SoyBaseN/AISS
GO:0007165GO-bp Annotation by Michelle Graham. GO Biological Process: signal transduction SoyBaseN/AISS
GO:0005622GO-cc Annotation by Michelle Graham. GO Cellular Compartment: intracellular SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0017111GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity SoyBaseN/AISS
GO:0043531GO-mf Annotation by Michelle Graham. GO Molecular Function: ADP binding SoyBaseN/AISS
PF00560PFAM Leucine Rich Repeat JGI ISS
UniRef100_I1N6X8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N6X8_SOYBN SoyBaseE_val: 2.00E-179ISS
UniRef100_Q8W2C0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Functional candidate resistance protein KR1 n=1 Tax=Glycine max RepID=Q8W2C0_SOYBN SoyBaseE_val: 1.00E-127ISS

Expression Patterns of Glyma19g07665
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g07665 not represented in the dataset
Glyma19g07665 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma19g07665 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma19g07665
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma19g07665
>Glyma19g07665.1   sequence type=CDS   gene model=Glyma19g07665   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCTAACGCTGATAAGGAGACTTTCAAGTGTAACCTGGTGAAGCTGGAGACATGGAAGATGGCCCTGCACCAAGTGGCTAACTTGTCTGGTTTACCATTTCAAAACATGGATGATGTTGTTTTTCTTGACATTGCTTGTTGTTTCAAAAAATATGATTTGGCAGAGGTCCAAGATATACTTCATGTTCATCATGGCCATTGCATGAAACATCATATTGGAGTCTTGGTTGAAAAATCTCTCATAAATATTAGTTTGGATGGCTATGTTACACTACATGACTTGATAGAGGACATGGATATAGTTCAAGTTTTAGAAGAGAACAAGAAGTTTGTGAATCTGACAAGTTTAAGTTTTGACTCCTCTCAACATTTAACACAGATGCCTGATGTATCTTGTATTCCACATTTGGAAAATTTGTCATTTATGGAGTGTGATAATTTATTTGCAATTCACCAGTCAGTTGGGCTCTTGAAAAAACTTAGAATCTTAGACGCAGAAGGTTGCCTCAGGCTTAAGTATTTTACCCCCATCAAGTTGACCTCTCTTGAGCAACTCAAACTTGGGTATTGTCACAGTCTTGAGAGTTTTCCTGAAATATTAGGAAAGATGGAAAACATAACAGACCTTGATTTGAGAGAAACTCCGGATGATGGTGCAGAGAATGTGAGCTCAACCACATCTTCAAAAGTTCAATATCTTGATCTCAGAAACTGCAACCTGTCAGATGAATTTTTTCCAATAGCTCTCCCATGCTTTGCTAATGTAATGGAAGAATGCCTATCCTTGACTTCCTCATGTAGAAGCATGTTACTCAATCAGGAACTGCATGAGGCTGGAAGAACCTGCTATTTGCTGCCAAGAGCCAAGATTCCAGAGTGGTTTGAGTTCCAAACATCGGAATTTCCAATTTCTTTCTGGTTTCATAATAAACTCCCAGCCATTGCTATTTGTCATGTTATTGAACAGGTCGCTGAGTTTTCCTCATCAAGAGGTTGGACATCTAGACCCAGCATTATAACCAACATGATCATCAATGGTAATGCAAATTTGTTTTACTCTATGGACTTGGGAAGTGATTGTTCAGTTCTTTTTGATCCGCAGGATGATAAAGTAACAGATAATTTAGATGAAGCACTTTTAGAAAATGAATGA
Predicted protein sequences of Glyma19g07665
>Glyma19g07665.1   sequence type=predicted peptide   gene model=Glyma19g07665   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPNADKETFKCNLVKLETWKMALHQVANLSGLPFQNMDDVVFLDIACCFKKYDLAEVQDILHVHHGHCMKHHIGVLVEKSLINISLDGYVTLHDLIEDMDIVQVLEENKKFVNLTSLSFDSSQHLTQMPDVSCIPHLENLSFMECDNLFAIHQSVGLLKKLRILDAEGCLRLKYFTPIKLTSLEQLKLGYCHSLESFPEILGKMENITDLDLRETPDDGAENVSSTTSSKVQYLDLRNCNLSDEFFPIALPCFANVMEECLSLTSSCRSMLLNQELHEAGRTCYLLPRAKIPEWFEFQTSEFPISFWFHNKLPAIAICHVIEQVAEFSSSRGWTSRPSIITNMIINGNANLFYSMDLGSDCSVLFDPQDDKVTDNLDEALLENE*






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