|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G05980 | AT | Annotation by Michelle Graham. TAIR10: DHFS-FPGS homolog B | chr5:1799738-1804177 REVERSE LENGTH=513 | SoyBase | E_val: 7.00E-26 | ISS |
GO:0006730 | GO-bp | Annotation by Michelle Graham. GO Biological Process: one-carbon metabolic process | SoyBase | N/A | ISS |
GO:0009058 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biosynthetic process | SoyBase | N/A | ISS |
GO:0009396 | GO-bp | Annotation by Michelle Graham. GO Biological Process: folic acid-containing compound biosynthetic process | SoyBase | N/A | ISS |
GO:0010449 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root meristem growth | SoyBase | N/A | ISS |
GO:0046901 | GO-bp | Annotation by Michelle Graham. GO Biological Process: tetrahydrofolylpolyglutamate biosynthetic process | SoyBase | N/A | ISS |
GO:0048364 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root development | SoyBase | N/A | ISS |
GO:0048767 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root hair elongation | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0009570 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma | SoyBase | N/A | ISS |
GO:0004326 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: tetrahydrofolylpolyglutamate synthase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0016874 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ligase activity | SoyBase | N/A | ISS |
UniRef100_I1MZ89 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Folylpolyglutamate synthase n=1 Tax=Glycine max RepID=I1MZ89_SOYBN | SoyBase | E_val: 6.00E-50 | ISS |
UniRef100_UPI000233F413 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233F413 related cluster n=1 Tax=unknown RepID=UPI000233F413 | SoyBase | E_val: 4.00E-50 | ISS |
Glyma19g05877 not represented in the dataset |
Glyma19g05877 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.19g044100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g05877.1 sequence type=CDS gene model=Glyma19g05877 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTGCATGTTATCAAGTCGTGTCTCCATACTTTCTGTTGGCTTCTTGAAGACTCGTACTTGAAACATATACAACACACTTTACCAAAGAAGTTCATAAAAGGGTTAACAACTACGAGTTTGCAAGGAAGGGCTCAGATTGTTCCTGATCAGTTCATCAATGATGAAATACCAAATGAACTTGTCTTCTTTTTAGATGGGGCTCATAGTCCTGAAAGCATGGAAGCATGCACTAAGTGGTTTTCTCTTGCTATTAAAGATGAAGACCAGATTTTGTTTCATCAAAAACCTGATAATTCTAACTTCTCAAGTAGTGAAGATGCACAATTGTGA
>Glyma19g05877.1 sequence type=predicted peptide gene model=Glyma19g05877 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLHVIKSCLHTFCWLLEDSYLKHIQHTLPKKFIKGLTTTSLQGRAQIVPDQFINDEIPNELVFFLDGAHSPESMEACTKWFSLAIKDEDQILFHQKPDNSNFSSSEDAQL*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||