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Report for Sequence Feature Glyma19g05470

Feature Type:gene_model
Chromosome:Gm19
Start:5947893
stop:5948119
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G41390AT Annotation by Michelle Graham. TAIR10: PLAC8 family protein | chr5:16565576-16567253 FORWARD LENGTH=264 SoyBaseE_val: 9.00E-22ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I3SV90UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Medicago truncatula RepID=I3SV90_MEDTR SoyBaseE_val: 1.00E-23ISS
UniRef100_Q9FN61UniRef Annotation by Michelle Graham. Most informative UniRef hit: Gb|AAF07369.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FN61_ARATH SoyBaseE_val: 8.00E-20ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma19g05470.1   sequence type=CDS   gene model=Glyma19g05470   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GCACCATGTGTGTCTTACCTTCTTCGCAAACGAGCCCTCTATGATGATATGTCAAGGTACACATTTTGTGCTGGCTACATGCCTTGCAGTGGTAGGTGTGGAGAAAGTAAATGTCCTGAGTTTTGCCTTTGCACTGAG

>Glyma19g05470.1   sequence type=predicted peptide   gene model=Glyma19g05470   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
APCVSYLLRKRALYDDMSRYTFCAGYMPCSGRCGESKCPEFCLCTE







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