|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G27920 | AT | Annotation by Michelle Graham. TAIR10: F-box family protein | chr5:9942063-9944507 REVERSE LENGTH=642 | SoyBase | E_val: 1.00E-44 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0009407 | GO-bp | Annotation by Michelle Graham. GO Biological Process: toxin catabolic process | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0004842 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ubiquitin-protein ligase activity | SoyBase | N/A | ISS |
PTHR23125 | Panther | F-BOX/LEUCINE RICH REPEAT PROTEIN | JGI | ISS | |
PTHR23125:SF147 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
UniRef100_G7KXH5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: F-box/LRR-repeat protein n=1 Tax=Medicago truncatula RepID=G7KXH5_MEDTR | SoyBase | E_val: 2.00E-66 | ISS |
UniRef100_UPI000233E340 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233E340 related cluster n=1 Tax=unknown RepID=UPI000233E340 | SoyBase | E_val: 1.00E-86 | ISS |
Glyma19g05430 not represented in the dataset |
Glyma19g05430 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g05430.1 sequence type=CDS gene model=Glyma19g05430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTGACTGAGAATTGTCTTTATCAACTTGGATTAAATTGCTCACTTCTCGAAGAGGTTGATCTTACTGATTGCTTTGGTATTGATGACATAGCTCTAAGATATCTATCAAGATGTTCAGAACTTGTAAGATTGAAATTAGGATTATGCACAAACATATCAGACATAGGATTGGCACACATTGCTTATAACTGCCCAAAAATGACTGAACTTGATCTCTATCGATGTGTACGTATTGGAGATGATGGGCTAGCGGCGCTAACGAGTGGATGCAAGGGGTTGACAAACCTCAACTTGTCATATTGCAATAGAATTACATATAGAGGGTTGAAGTATATCTGCCATCTTGGTGAACTATCTGATCTGGAGTTGTGTGGGCTTTCAAATATCACAAGTGTTGGTATAAAAGCAGTTGCAATAAGTTTCTGGGCCCATGCTTTTTATTCAGAAAACCTATCGCAG
>Glyma19g05430.1 sequence type=predicted peptide gene model=Glyma19g05430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVTENCLYQLGLNCSLLEEVDLTDCFGIDDIALRYLSRCSELVRLKLGLCTNISDIGLAHIAYNCPKMTELDLYRCVRIGDDGLAALTSGCKGLTNLNLSYCNRITYRGLKYICHLGELSDLELCGLSNITSVGIKAVAISFWAHAFYSENLSQ
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||