|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G24503 | AT | Annotation by Michelle Graham. TAIR10: aldehyde dehydrogenase 2C4 | chr3:8919732-8923029 REVERSE LENGTH=501 | SoyBase | E_val: 8.00E-27 | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009627 | GO-bp | Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance | SoyBase | N/A | ISS |
GO:0009699 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phenylpropanoid biosynthetic process | SoyBase | N/A | ISS |
GO:0010167 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to nitrate | SoyBase | N/A | ISS |
GO:0015706 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nitrate transport | SoyBase | N/A | ISS |
GO:0034976 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0004028 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity | SoyBase | N/A | ISS |
GO:0004029 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: aldehyde dehydrogenase (NAD) activity | SoyBase | N/A | ISS |
GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
GO:0050269 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: coniferyl-aldehyde dehydrogenase activity | SoyBase | N/A | ISS |
PTHR11699 | Panther | ALDEHYDE DEHYDROGENASE-RELATED | JGI | ISS | |
PTHR11699:SF46 | Panther | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE-RELATED | JGI | ISS | |
PF00171 | PFAM | Aldehyde dehydrogenase family | JGI | ISS | |
UniRef100_G7KNI3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Aldehyde dehydrogenase n=1 Tax=Medicago truncatula RepID=G7KNI3_MEDTR | SoyBase | E_val: 5.00E-34 | ISS |
UniRef100_I1L4G9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L4G9_SOYBN | SoyBase | E_val: 2.00E-38 | ISS |
Glyma19g05400 not represented in the dataset |
Glyma19g05400 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g05400.1 sequence type=CDS gene model=Glyma19g05400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GGAGAAGTTTGTGCTGCAGGCTCCCGCGTACTTGTTCAGGAAGGGATCTATGATGAATTTGAGAAGAGGTTGGCAGAGAAGGCAAAAGCTTGGGTTGTTGGGGATCCCTTTGATCCTAATGTTCAGCAAGGGCCTCAGGATCCTCCTCTAGTGACTTACATTACAACTTGCTATGGTAGAGAAGAGGCCACCCTTTTGACAGGGGGCAAAAGAGTGGGTAACAAGGGTTACTACATTGAGCCAACAATTTTCTCCAAT
>Glyma19g05400.1 sequence type=predicted peptide gene model=Glyma19g05400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GEVCAAGSRVLVQEGIYDEFEKRLAEKAKAWVVGDPFDPNVQQGPQDPPLVTYITTCYGREEATLLTGGKRVGNKGYYIEPTIFSN
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||