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Report for Sequence Feature Glyma19g05130

Feature Type:gene_model
Chromosome:Gm19
Start:5403313
stop:5403903
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G22370AT Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 85A5 | chr1:7898116-7899879 REVERSE LENGTH=479 SoyBaseE_val: 4.00E-34ISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0015020GO-mf Annotation by Michelle Graham. GO Molecular Function: glucuronosyltransferase activity SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PTHR11926:SF15Panther UDP-GLUCURONOSYLTRANSFERASE RELATED JGI ISS
UniRef100_G7KM92UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cytokinin-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7KM92_MEDTR SoyBaseE_val: 5.00E-47ISS
UniRef100_I1N6I5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N6I5_SOYBN SoyBaseE_val: 1.00E-85ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g05130 not represented in the dataset

Glyma19g05130 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.19g038500 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma19g05130.2   sequence type=CDS   gene model=Glyma19g05130   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTTTCTCAGCAGAGAGAAAGCCACATGCTGTGTTCTCTCCATTTCCCATACAAGGTCATATCAACCCATTGTTTAAACTAGCAAAGCTACTTCATCTAAGAGGCTTTCACATAACCTTTGTCCACACAGAACACAATCACAAACTCTTGCTCAAATCAAGGGGTCTCAATGCCCTTGAAGACTTTTTTTGCTTTGAGAGCATCCTAGATGGTGTTCCTCCCAATAATGATGACAATCTTGATGCCACTCATCATGTAGTTTCTCTTTATTGTGCCATGACCTTTACTATAGAAGCTGCTGAAGAACTTTCACTTCCTATCCTTCTCTTTCATCCAGCTAGTGCTAGTACATTATTGTATGGTTTGCACTTTCGTACTCTGTTGGATAAAGGTCTCATACCACTCAAA

>Glyma19g05130.2   sequence type=predicted peptide   gene model=Glyma19g05130   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSFSAERKPHAVFSPFPIQGHINPLFKLAKLLHLRGFHITFVHTEHNHKLLLKSRGLNALEDFFCFESILDGVPPNNDDNLDATHHVVSLYCAMTFTIEAAEELSLPILLFHPASASTLLYGLHFRTLLDKGLIPLK







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