|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G02360 | AT | Annotation by Michelle Graham. TAIR10: 6-phosphogluconate dehydrogenase family protein | chr3:482498-483958 FORWARD LENGTH=486 | SoyBase | E_val: 0 | ISS |
GO:0006098 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pentose-phosphate shunt | SoyBase | N/A | ISS |
GO:0006888 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ER to Golgi vesicle-mediated transport | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0009744 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to sucrose stimulus | SoyBase | N/A | ISS |
GO:0009749 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to glucose stimulus | SoyBase | N/A | ISS |
GO:0009750 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus | SoyBase | N/A | ISS |
GO:0010359 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of anion channel activity | SoyBase | N/A | ISS |
GO:0043090 | GO-bp | Annotation by Michelle Graham. GO Biological Process: amino acid import | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005777 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: peroxisome | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0009570 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0004616 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphogluconate dehydrogenase (decarboxylating) activity | SoyBase | N/A | ISS |
GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
GO:0016616 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | SoyBase | N/A | ISS |
GO:0050661 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NADP binding | SoyBase | N/A | ISS |
GO:0050662 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: coenzyme binding | SoyBase | N/A | ISS |
KOG2653 | KOG | 6-phosphogluconate dehydrogenase | JGI | ISS | |
PTHR11811 | Panther | 6-PHOSPHOGLUCONATE DEHYDROGENASE | JGI | ISS | |
PF00393 | PFAM | 6-phosphogluconate dehydrogenase, C-terminal domain | JGI | ISS | |
PF03446 | PFAM | NAD binding domain of 6-phosphogluconate dehydrogenase | JGI | ISS | |
UniRef100_I1N6I4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: 6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Glycine max RepID=I1N6I4_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_I1N6I4 | UniRef | Annotation by Michelle Graham. Best UniRef hit: 6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Glycine max RepID=I1N6I4_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma19g05120 not represented in the dataset |
Glyma19g05120 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.19g038400 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g05120.2 sequence type=CDS gene model=Glyma19g05120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAATTTTCGAACATTGAACAGGAAATTAACCATGGCTCAACCTGCAAGCCTCACAAGAATAGGCCTTGCTGGCCTGGCTGTGATGGGCCAAAACCTTGCTCTCAACATTGCTGAGAAAGGCTTTCCCATTTCTGTCTACAACCGGACCGCGTCCAAGGTTGATGAGACAGTTGAAAGAGCAAAACAAGAAGGAAACCTTCCTGTGTATGGCTACCATGACCCTAAATTCTTTGTCCAATCCATTCAAAAGCCAAGGGTCATAATAATGCTTGTCAAGGCTGGTGCACCTGTTGACCAAACCATCAAGACCCTCTCAGCACACTTGGAAAAGGGTGATTGCATCATTGATGGTGGCAATGAGTGGTATGAGAACACTGAGAGAAGAGAGAAAGCGATGTCCGAATTGGGTCTTCTCTACCTTGGGATGGGAGTTTCAGGTGGTGAAGAAGGTGCAAGACATGGTCCCTCTTTGATGCCTGGTGGTTCATTCGAGGCCTACAAGTACATAGAAGACATTCTCCTCAAGGTGGCCGCACAAGTCCCTGATAGTGGTCCTTGTGTGACCTACATCGGCAAAGGTGGATCAGGAAATTTTGTGAAAATGATCCACAATGGAATTGAGTATGGTGACATGCAGCTCATTGCTGAGGCCTATGATGTGCTAAAGTCGGTTGGAAAGTTGTCAAATGAGGAGCTGCAAAGTGCGTTTTCGGAATGGAACAAAGGGGAACTCCTGAGTTTCCTCATCGAGATCACCGCTGACATATTTGGAATCAAGGATGACAAAGGAGAAGGGCATTTGGTAGATAAGGTTTTGGACAAAACTGGCATGAAGGGAACTGGCAAATGGACCGTGCAACAAGCTGCTGAGTTATCAATTGCTGCTCCCACAATAGAGGCCTCTTTGGATGCAAGGTTCCTCAGTGGATTGAAAGAGGAGAGAGTTGAAGCTTCAAAGGTGTTTAAGTCAAGTGGCTTTGATGAAATCTTGAGTGACCAACATGTTGACAAAAAGCAGCTCATTGATGATGTTAGGAAGGCTCTTTATGCTGCCAAGATCTGTAGTTATGCACAAGGAATGAATCTGATCAGGGCAAAGAGCATTGAGAAAGGTTGGGACTTGAAGTTGGGGGAACTTGCAAGGATTTGGAAAGGGGGTTGCATCATAAGAGCAATATTTTTGGACAGAATCAAGAAAGCATACGACAGAAATCCTAACCTTGCAAACCTTCTTGTGGATCCAGAATTTGCAAAGGAAATAGTGGATAGACAATCTGCATGGAGAAGAGTTGTGTGTCTTGCTATCAACTATGGCACTAGCACACCAGGCATGGCTGCTAGTCTTGCTTATTTTGACACATATAGAAGGGAACGGGTGCCAGCAAATTTGGTTCAGGCTCAGAGAGACTACTTTGGTGCTCACACATATGAGAGGATTGACATGGAGGGATCCTTCCACACTGAGTGGTTCAAGCTTGCAAAACAGTCAAGGACTTAG
>Glyma19g05120.2 sequence type=predicted peptide gene model=Glyma19g05120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MNFRTLNRKLTMAQPASLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVERAKQEGNLPVYGYHDPKFFVQSIQKPRVIIMLVKAGAPVDQTIKTLSAHLEKGDCIIDGGNEWYENTERREKAMSELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLSNEELQSAFSEWNKGELLSFLIEITADIFGIKDDKGEGHLVDKVLDKTGMKGTGKWTVQQAAELSIAAPTIEASLDARFLSGLKEERVEASKVFKSSGFDEILSDQHVDKKQLIDDVRKALYAAKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAIFLDRIKKAYDRNPNLANLLVDPEFAKEIVDRQSAWRRVVCLAINYGTSTPGMAASLAYFDTYRRERVPANLVQAQRDYFGAHTYERIDMEGSFHTEWFKLAKQSRT*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||