|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G08510 | AT | Annotation by Michelle Graham. TAIR10: phospholipase C 2 | chr3:2582626-2585556 REVERSE LENGTH=552 | SoyBase | E_val: 8.00E-43 | ISS |
GO:0006629 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid metabolic process | SoyBase | N/A | ISS |
GO:0007165 | GO-bp | Annotation by Michelle Graham. GO Biological Process: signal transduction | SoyBase | N/A | ISS |
GO:0030048 | GO-bp | Annotation by Michelle Graham. GO Biological Process: actin filament-based movement | SoyBase | N/A | ISS |
GO:0035556 | GO-bp | Annotation by Michelle Graham. GO Biological Process: intracellular signal transduction | SoyBase | N/A | ISS |
GO:0051645 | GO-bp | Annotation by Michelle Graham. GO Biological Process: Golgi localization | SoyBase | N/A | ISS |
GO:0051646 | GO-bp | Annotation by Michelle Graham. GO Biological Process: mitochondrion localization | SoyBase | N/A | ISS |
GO:0060151 | GO-bp | Annotation by Michelle Graham. GO Biological Process: peroxisome localization | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0004435 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol phospholipase C activity | SoyBase | N/A | ISS |
GO:0004629 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phospholipase C activity | SoyBase | N/A | ISS |
GO:0008081 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphoric diester hydrolase activity | SoyBase | N/A | ISS |
PTHR10336 | Panther | PHOSPHOLIPASE C-RELATED | JGI | ISS | |
PTHR10336:SF35 | Panther | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY P | JGI | ISS | |
PF09279 | PFAM | Phosphoinositide-specific phospholipase C, efhand-like | JGI | ISS | |
UniRef100_Q43443 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Phosphoinositide-specific phospholipase C P13 n=1 Tax=Glycine max RepID=Q43443_SOYBN | SoyBase | E_val: 7.00E-71 | ISS |
UniRef100_UPI000233E1C0 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233E1C0 related cluster n=1 Tax=unknown RepID=UPI000233E1C0 | SoyBase | E_val: 3.00E-86 | ISS |
Glyma19g04836 not represented in the dataset |
Glyma19g04836 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g04836.1 sequence type=CDS gene model=Glyma19g04836 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACGTCAAAACAAACATACAGTGTGTGCTTCTACTGGCGGCAGTGGCTCAAGCTGGTGCTGGCGGAGGTGCCGTCAGAAATCAAGACCCTGTTCGATGAGTATTCCGAGAATGAGCTCATGACACCTTCGCATCTCAAGAGATTCTTGATCGAAAGGCAAGAGAAGGCCACTGAAGAAGACACACAAGCCATCATTAATAGGTTTAGGCATTTCCATCACAAAGGGGTTGGCCTCAATCTTGAAACTTTCTTTAAGTACCTCTTTAGTGAAGATAATCCTCCTCTTCTTCCTTCTCATGGGGTGCACCATGATATGACTTTACCCTTGTCACATTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATTAG
>Glyma19g04836.1 sequence type=predicted peptide gene model=Glyma19g04836 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTSKQTYSVCFYWRQWLKLVLAEVPSEIKTLFDEYSENELMTPSHLKRFLIERQEKATEEDTQAIINRFRHFHHKGVGLNLETFFKYLFSEDNPPLLPSHGVHHDMTLPLSHYFIYTGHNSYLTGN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||