SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
|
A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G22380 | AT | Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 85A3 | chr1:7900522-7902332 REVERSE LENGTH=488 | SoyBase | E_val: 0 | ISS |
| GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
| GO:0015824 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proline transport | SoyBase | N/A | ISS |
| GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
| GO:0015020 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: glucuronosyltransferase activity | SoyBase | N/A | ISS |
| GO:0016757 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups | SoyBase | N/A | ISS |
| GO:0016758 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups | SoyBase | N/A | ISS |
| KOG1192 | KOG | UDP-glucuronosyl and UDP-glucosyl transferase | JGI | ISS | |
| PTHR11926 | Panther | GLUCOSYL/GLUCURONOSYL TRANSFERASES | JGI | ISS | |
| PTHR11926:SF15 | Panther | UDP-GLUCURONOSYLTRANSFERASE RELATED | JGI | ISS | |
| PF00201 | PFAM | UDP-glucoronosyl and UDP-glucosyl transferase | JGI | ISS | |
| UniRef100_G7KLV5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Cytokinin-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7KLV5_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_I1N6G2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N6G2_SOYBN | SoyBase | E_val: 0 | ISS |
|
Glyma19g04570 not represented in the dataset |
Glyma19g04570 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.19g035800 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g04570.1 sequence type=CDS gene model=Glyma19g04570 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTAACTCTACAGAGAGAAAGCCACATGCACTGTTGACACCATATCCACTTCAAGGCCATATCAACCCATTGTTCAGATTAGCAAAGCTGCTTCATCTGAGAGGCTTTCACATAACCTTTGTCCACACTGAATACAACATTAAACGCTTGCTCAACTCAAGGGGTCCTAAAGCCCTTGATGGCCTTCAAGACTTTCATTTTGAGACCATACCAGATAGTCTTCCCCCCACATATGGTGATGGTGATGTCACTGAAGACGCAGTGTCTCTTGCTAAATCAGTGAGAGAGAAGATGCTCGTACCCTTTCGCGATCTTCTTGCTCGTCTTCAGGATTCTTCCACTGCTGGCCTTGTACCTCCAGTTACTTGCTTGGTTTCTGATTGTTCCATGCTTTTTACTATACAAGCTGCTGAAGAACTTTCACTTCCTATTGCTCTATTTTCACCGGTCAGTGCTTGTGCCTTAATGTCTATTTTGCACTACCGTTCTCTTTTTGATAAGGGTCTCATACCACTCAAAGATAAGAGTTATTTGACAAATGGGTATTTGGACACAAAAGTGGACTGGATACCAGGAATGAAAAACTTTAAACTGAAGGACCTGCCTACCTTTATAAGGACCACAGATCCAAATGACTTCTTGTTAAAATTTCTCATTGAAGAAGGAGATAATATGCAAAGAAGTTCTGCTATTATTTTAAATACTTTTGCTGAACTTGAGAGTGATGTACTGAATGCTCTCACCTCTATGTTCCCTTCTCTTTACCCCATTGGCCCTCTCCCTTCATTTTTAAACCAAAGTCCACAGAATCACTTGGCTTCTCTAGGTTCCAATCTTTGGAAGGAAGATACTGAGTATCTTGAATGGCTTAAATCCAAGGAACCAAAGTCTGTTGTTTATGTGAACTTTGGTAGCATCACAGTTATGTCTCCAGAGCAACTTTTGGAGTTTGCTTGGGGTTTGGCCAACAGCAAGAGACCCTTTTTGTGGATCATTAGGCCTGACCTTGTCGTGGGTGGCTCAATGATTTTATCATCTGAGTTTGTCAATGAAACTTTAGATAGAGGCCTAATAGCAAGCTGGTGTCCACAAGAGGAAGTGCTGAACCACCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACAATTGAAGGCATTTGTGCTGGTGTGCCAATGCTGTGTTGGCCACTTTTTGCTGATCAGCCAACTAACTGTAGACACATTTGCAAAGAATGGGGCATTGGGATTGAAATTAACACCAATGCGAAGAGAGAGGAGGTGGAGAAACAGGTCAATGAATTGATGGAGGGAGAGAAAGGAAAGAAGATGAGGCAAAAGGTCATGGAGTTGAAGAAGAAGGCAGAGGAGGGCACCAAACTAGGTGGTCTTTCACACATTAACTTGGACAAAGTGATTTGGGAAGTGCTGCTTAAAAAAAATTAG
>Glyma19g04570.1 sequence type=predicted peptide gene model=Glyma19g04570 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSNSTERKPHALLTPYPLQGHINPLFRLAKLLHLRGFHITFVHTEYNIKRLLNSRGPKALDGLQDFHFETIPDSLPPTYGDGDVTEDAVSLAKSVREKMLVPFRDLLARLQDSSTAGLVPPVTCLVSDCSMLFTIQAAEELSLPIALFSPVSACALMSILHYRSLFDKGLIPLKDKSYLTNGYLDTKVDWIPGMKNFKLKDLPTFIRTTDPNDFLLKFLIEEGDNMQRSSAIILNTFAELESDVLNALTSMFPSLYPIGPLPSFLNQSPQNHLASLGSNLWKEDTEYLEWLKSKEPKSVVYVNFGSITVMSPEQLLEFAWGLANSKRPFLWIIRPDLVVGGSMILSSEFVNETLDRGLIASWCPQEEVLNHPSIGGFLTHCGWNSTIEGICAGVPMLCWPLFADQPTNCRHICKEWGIGIEINTNAKREEVEKQVNELMEGEKGKKMRQKVMELKKKAEEGTKLGGLSHINLDKVIWEVLLKKN*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
|
|
|
