Glyma19g03760 - SoyBase

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Report for Sequence Feature Glyma19g03760

Feature Type:	gene_model
Chromosome:	Gm19
Start:	3763949
stop:	3765708
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma19g03760

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G39090	AT	Annotation by Michelle Graham. TAIR10: HXXXD-type acyl-transferase family protein \| chr5:15643612-15644958 FORWARD LENGTH=448	SoyBase	E_val: 2.00E-95	ISS
GO:0015824	GO-bp	Annotation by Michelle Graham. GO Biological Process: proline transport	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0016740	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity	SoyBase	N/A	ISS
GO:0016747	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups	SoyBase	N/A	ISS
PF02458	PFAM	Transferase family	JGI		ISS
UniRef100_A7BID0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Malonyl-CoA:isoflavone 7-O-glucoside-6''-O-malonyltransferase n=2 Tax=Glycine max RepID=A7BID0_SOYBN	SoyBase	E_val: 2.00E-168	ISS
UniRef100_I1N6C3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N6C3_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma19g03760

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma19g03760 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.19g030700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma19g03760

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma19g03760

Limit To All Plant Sequences

>Glyma19g03760.1   sequence type=CDS   gene model=Glyma19g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCAAGGATCAAATCAATTAGTTTCTTAGCCATGGAGAAAGCAACAAGAGTGAAAATACTTGAAATTTGCCTTGTGTCACCACCACAGGAAAAAACGACAACACAAACATCTTTGTCTCTCACATTCTTTGAGTTACTATGGCTGAGGCTTCCCCCAGTTGAGCGTCTTTTCTTCTATGAATTCCCCAACCAAACCATTTCATTCTTCGACACCATTCTTCCAAATCTCAAACACTCTCTTTCCCTCACACTCCAACACTTTCTACCTTTTGCTGGCTCCATCATTTGGCCCCTTGACTCACCCCACCCCATCATCAACTATGTCCCTGGCAATGCCGTTTCCCTCACCATAGCTGAGTCCAACACTGACTTCAACATGCTTTGTTCCAATATCTGTGATGCTTCTCTACGCCATCCCTTGATACCCCATTTGGCCAATTCACACGAACAAGCTTCTGTGATGGCCCTCCAAGTTACCCTTTTTCCAAACCATGGCTTTTCTCTTGGAATAGCCACACACCATGCAGCTATGGATGGAAAAGCCTCAACTTTGTTTCTCAAAGCATGGGCCTATGCTTGCTCCAATAATAATAATAACCTCATTGGAGAATCATTCTCATCACCTTTGTTGTCATTACCACAACATCTCACACCCTTCTATGATAGGTCAACGATAAGAGACACTTCAGGGATTGGTGCAGATTATTTGTCTGCTTGGTTGCACTATGGTGGAGATAATAATAGTAGGAGCATGAAGGTGTTGGATCAATTCGGTGGTGGTGTAAATGCAACGACAAAAGAAGCAATCAGATGGTCGTTTGAATTAACCTCATCGAACATCCAAAAGCTCAAGCATCATGCACAATCCAAGCTCAAAGAAGAGAATGCTCACTTTTCAACATTTTCGGTTACATGTGCTTATGTGTTGCAATGTTTGGTCAAAGCAGACAAACCAAAGGCCAATGGAGTGGCTTTTTTGTTCAGTGTGGATTGCAGGTCTCGCTTGGAGCCACCTCTTCCATCAACATATGTTGGAAGCTGCATTATTGGCCATAAGGTTCTGTATGAAACAAAGAATTTGTCAGGGGATGATGATTTCATCAATGCTCTCAAGGGGATAAAAGAAGCTTTGCAAAAGTTGGAGAATGAAGTGCTAAGTGGAGCAACAACTTTGGCAGAAAAGGTGCAAATGCGGATGAATAATAAAATATTTACTGTTGGTGGGTCACCACGGTTTGAGGTTTATAGCATTGATTTTGGTTGGGGGAGGCCCAAGAAGGTGGATGTGACTTCTATAGGCCCAACCGGAGGATTTTTCATTTCTGAAAGTAGGAATGACAGTGGAGGAATTGAGATTACTTTGGTGTTATACAAACAAGAAATGGAATCATTCATGACTCATTTTGCTGAAGGACTTGAATCTCTTTGA

Predicted protein sequences of Glyma19g03760

Limit To All Plant Sequences

>Glyma19g03760.1   sequence type=predicted peptide   gene model=Glyma19g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSRIKSISFLAMEKATRVKILEICLVSPPQEKTTTQTSLSLTFFELLWLRLPPVERLFFYEFPNQTISFFDTILPNLKHSLSLTLQHFLPFAGSIIWPLDSPHPIINYVPGNAVSLTIAESNTDFNMLCSNICDASLRHPLIPHLANSHEQASVMALQVTLFPNHGFSLGIATHHAAMDGKASTLFLKAWAYACSNNNNNLIGESFSSPLLSLPQHLTPFYDRSTIRDTSGIGADYLSAWLHYGGDNNSRSMKVLDQFGGGVNATTKEAIRWSFELTSSNIQKLKHHAQSKLKEENAHFSTFSVTCAYVLQCLVKADKPKANGVAFLFSVDCRSRLEPPLPSTYVGSCIIGHKVLYETKNLSGDDDFINALKGIKEALQKLENEVLSGATTLAEKVQMRMNNKIFTVGGSPRFEVYSIDFGWGRPKKVDVTSIGPTGGFFISESRNDSGGIEITLVLYKQEMESFMTHFAEGLESL*

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