Report for Sequence Feature Glyma19g03760
Feature Type: gene_model
Chromosome: Gm19
Start: 3763949
stop: 3765708
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g03760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G39090 AT
Annotation by Michelle Graham. TAIR10: HXXXD-type acyl-transferase family protein | chr5:15643612-15644958 FORWARD LENGTH=448
SoyBase E_val: 2.00E-95 ISS
GO:0015824 GO-bp
Annotation by Michelle Graham. GO Biological Process: proline transport
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0016740 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity
SoyBase N/A ISS
GO:0016747 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups
SoyBase N/A ISS
PF02458 PFAM
Transferase family
JGI ISS
UniRef100_A7BID0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Malonyl-CoA:isoflavone 7-O-glucoside-6''-O-malonyltransferase n=2 Tax=Glycine max RepID=A7BID0_SOYBN
SoyBase E_val: 2.00E-168 ISS
UniRef100_I1N6C3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N6C3_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g03760
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma19g03760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g030700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g03760
Coding sequences of Glyma19g03760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g03760.1 sequence type=CDS gene model=Glyma19g03760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCAAGGATCAAATCAATTAGTTTCTTAGCCATGGAGAAAGCAACAAGAGTGAAAATACTTGAAATTTGCCTTGTGTCACCACCACAGGAAAAAACGACAACACAAACATCTTTGTCTCTCACATTCTTTGAGTTACTATGGCTGAGGCTTCCCCCAGTTGAGCGTCTTTTCTTCTATGAATTCCCCAACCAAACCATTTCATTCTTCGACACCATTCTTCCAAATCTCAAACACTCTCTTTCCCTCACACTCCAACACTTTCTACCTTTTGCTGGCTCCATCATTTGGCCCCTTGACTCACCCCACCCCATCATCAACTATGTCCCTGGCAATGCCGTTTCCCTCACCATAGCTGAGTCCAACACTGACTTCAACATGCTTTGTTCCAATATCTGTGATGCTTCTCTACGCCATCCCTTGATACCCCATTTGGCCAATTCACACGAACAAGCTTCTGTGATGGCCCTCCAAGTTACCCTTTTTCCAAACCATGGCTTTTCTCTTGGAATAGCCACACACCATGCAGCTATGGATGGAAAAGCCTCAACTTTGTTTCTCAAAGCATGGGCCTATGCTTGCTCCAATAATAATAATAACCTCATTGGAGAATCATTCTCATCACCTTTGTTGTCATTACCACAACATCTCACACCCTTCTATGATAGGTCAACGATAAGAGACACTTCAGGGATTGGTGCAGATTATTTGTCTGCTTGGTTGCACTATGGTGGAGATAATAATAGTAGGAGCATGAAGGTGTTGGATCAATTCGGTGGTGGTGTAAATGCAACGACAAAAGAAGCAATCAGATGGTCGTTTGAATTAACCTCATCGAACATCCAAAAGCTCAAGCATCATGCACAATCCAAGCTCAAAGAAGAGAATGCTCACTTTTCAACATTTTCGGTTACATGTGCTTATGTGTTGCAATGTTTGGTCAAAGCAGACAAACCAAAGGCCAATGGAGTGGCTTTTTTGTTCAGTGTGGATTGCAGGTCTCGCTTGGAGCCACCTCTTCCATCAACATATGTTGGAAGCTGCATTATTGGCCATAAGGTTCTGTATGAAACAAAGAATTTGTCAGGGGATGATGATTTCATCAATGCTCTCAAGGGGATAAAAGAAGCTTTGCAAAAGTTGGAGAATGAAGTGCTAAGTGGAGCAACAACTTTGGCAGAAAAGGTGCAAATGCGGATGAATAATAAAATATTTACTGTTGGTGGGTCACCACGGTTTGAGGTTTATAGCATTGATTTTGGTTGGGGGAGGCCCAAGAAGGTGGATGTGACTTCTATAGGCCCAACCGGAGGATTTTTCATTTCTGAAAGTAGGAATGACAGTGGAGGAATTGAGATTACTTTGGTGTTATACAAACAAGAAATGGAATCATTCATGACTCATTTTGCTGAAGGACTTGAATCTCTTTGA
Predicted protein sequences of Glyma19g03760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g03760.1 sequence type=predicted peptide gene model=Glyma19g03760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSRIKSISFLAMEKATRVKILEICLVSPPQEKTTTQTSLSLTFFELLWLRLPPVERLFFYEFPNQTISFFDTILPNLKHSLSLTLQHFLPFAGSIIWPLDSPHPIINYVPGNAVSLTIAESNTDFNMLCSNICDASLRHPLIPHLANSHEQASVMALQVTLFPNHGFSLGIATHHAAMDGKASTLFLKAWAYACSNNNNNLIGESFSSPLLSLPQHLTPFYDRSTIRDTSGIGADYLSAWLHYGGDNNSRSMKVLDQFGGGVNATTKEAIRWSFELTSSNIQKLKHHAQSKLKEENAHFSTFSVTCAYVLQCLVKADKPKANGVAFLFSVDCRSRLEPPLPSTYVGSCIIGHKVLYETKNLSGDDDFINALKGIKEALQKLENEVLSGATTLAEKVQMRMNNKIFTVGGSPRFEVYSIDFGWGRPKKVDVTSIGPTGGFFISESRNDSGGIEITLVLYKQEMESFMTHFAEGLESL*