|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G39210 | AT | Annotation by Michelle Graham. TAIR10: chlororespiratory reduction 7 | chr5:15703231-15703999 FORWARD LENGTH=156 | SoyBase | E_val: 4.00E-40 | ISS |
GO:0000023 | GO-bp | Annotation by Michelle Graham. GO Biological Process: maltose metabolic process | SoyBase | N/A | ISS |
GO:0010207 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosystem II assembly | SoyBase | N/A | ISS |
GO:0010275 | GO-bp | Annotation by Michelle Graham. GO Biological Process: NAD(P)H dehydrogenase complex assembly | SoyBase | N/A | ISS |
GO:0016556 | GO-bp | Annotation by Michelle Graham. GO Biological Process: mRNA modification | SoyBase | N/A | ISS |
GO:0019252 | GO-bp | Annotation by Michelle Graham. GO Biological Process: starch biosynthetic process | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009570 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma | SoyBase | N/A | ISS |
GO:0010598 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: NAD(P)H dehydrogenase complex (plastoquinone) | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
PF12095 | PFAM | Protein of unknown function (DUF3571) | JGI | ISS | |
UniRef100_I1N6B9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1N6B9_SOYBN | SoyBase | E_val: 1.00E-91 | ISS |
UniRef100_Q9FL87 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Chlororespiratory reduction 7 n=1 Tax=Arabidopsis thaliana RepID=Q9FL87_ARATH | SoyBase | E_val: 2.00E-37 | ISS |
Glyma19g03690 not represented in the dataset |
Glyma19g03690 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.19g030200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g03690.2 sequence type=CDS gene model=Glyma19g03690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTAGGTGTTTTGCAGTCTCAGCCCTTCAATGTTGGAGTTCGTTCCCTCATCTCTGCAGAAAGTTACTATATTCAGAATCGCTTAGTCTATATAACATCACCAGGCATAGTTAAATGTTTTAGTTCTTCAATCCATCAGAGACTGCCTCGAGTTACAGGTGATTGCAGAAGTAAAACTAAGGTTTTTGCATTGAGGCGGAGAAGAAGGGCAAATGAGAGAACTGAAACGTATGTGCTACTAGAACCAGGGCAGGATGAGAGATTTGTTTCTGAGGAAGAGTTAAAGGCAACGTTGAAAGAGTTGTTGGAAAATTGGCCTGGCAAGGTTCTTCCCCCTGATCTTTCAAGATATGAGAACATTGATGATGCTGTTTCTTTCCTAGTGAGATCCGTTTGTGAACTTGAAATTGATGGAGATGTTGGCTCAATCCAATGGTATGAAGTTCGTTTGGAGTGA
>Glyma19g03690.2 sequence type=predicted peptide gene model=Glyma19g03690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVGVLQSQPFNVGVRSLISAESYYIQNRLVYITSPGIVKCFSSSIHQRLPRVTGDCRSKTKVFALRRRRRANERTETYVLLEPGQDERFVSEEELKATLKELLENWPGKVLPPDLSRYENIDDAVSFLVRSVCELEIDGDVGSIQWYEVRLE*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||