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Report for Sequence Feature Glyma19g03483

Feature Type:gene_model
Chromosome:Gm19
Start:3495811
stop:3496742
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma19g03483
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G22340AT Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 85A7 | chr1:7890464-7892090 REVERSE LENGTH=487 SoyBaseE_val: 3.00E-59ISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0008194GO-mf Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity SoyBaseN/AISS
GO:0015020GO-mf Annotation by Michelle Graham. GO Molecular Function: glucuronosyltransferase activity SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PTHR11926:SF15Panther UDP-GLUCURONOSYLTRANSFERASE RELATED JGI ISS
PF00201PFAM UDP-glucoronosyl and UDP-glucosyl transferase JGI ISS
UniRef100_G7KLV5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cytokinin-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7KLV5_MEDTR SoyBaseE_val: 7.00E-99ISS
UniRef100_I1MDX6UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MDX6_SOYBN SoyBaseE_val: 2.00E-99ISS

Expression Patterns of Glyma19g03483
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g03483 not represented in the dataset
Glyma19g03483 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma19g03483 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma19g03483
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma19g03483
>Glyma19g03483.1   sequence type=CDS   gene model=Glyma19g03483   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GAGAGTTATTTGACAAATGGGTATTTGGACACAAAAGTGGACTGTATTAGCCTCTGCTATTTTCATAATACTTTTGATGAACTTGAGAGTGATGTATTGAATGCTCTCTCCTCTATGCCCCCTTCTCATTACACCATTGGTCCTTTCCCTTCATTTTTAAATCAAAATGCTGAGTGTCTTGAGTGGCTTGAATCCAAGGAACCTAAGTCTGCTGTCTATGTGAATTATGGTAGCATCACGGTTATGTCTCCGGAGAAACTTTTAGAGTTTGCATGGGGTTTGGCCAACAGCAAGAGACCCTTTTTAGGCCTAATAGCAAGCTGGTGTCCACAAGAGCAATTGCTGAACCACCCTTCAATTGGTAGATTCTTGACTCATTGTGGATGGAACTCAACAATTGAAAGCATTTGTGCAGGTCCAACAAATTGTAGATATATATGCAATGAATGGGACATTGGGGTTGAAAATGATACCAATGTGAAGAGAGAGGAAGTGGAAAAGCTGGTCAATGAATTGATGGTGGGAGAGAAAGGAAAGAAAATGAGGCAAAAGGTTATGGAGTTGAAGAAGAAGGCAGAGGACGACACTAGTACCAATGGTCGTTCATACATGAAATTGGACAAAGAGATTAGTGAGGTGCTTCTTAGACAAAATTAG
Predicted protein sequences of Glyma19g03483
>Glyma19g03483.1   sequence type=predicted peptide   gene model=Glyma19g03483   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ESYLTNGYLDTKVDCISLCYFHNTFDELESDVLNALSSMPPSHYTIGPFPSFLNQNAECLEWLESKEPKSAVYVNYGSITVMSPEKLLEFAWGLANSKRPFLGLIASWCPQEQLLNHPSIGRFLTHCGWNSTIESICAGPTNCRYICNEWDIGVENDTNVKREEVEKLVNELMVGEKGKKMRQKVMELKKKAEDDTSTNGRSYMKLDKEISEVLLRQN*






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