|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G36720 | AT | Annotation by Michelle Graham. TAIR10: HVA22-like protein K | chr4:17307769-17309668 FORWARD LENGTH=200 | SoyBase | E_val: 1.00E-44 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
PTHR12300 | Panther | HVA22-LIKE PROTEINS | JGI | ISS | |
PTHR12300:SF12 | Panther | HVA22-LIKE PROTEIN | JGI | ISS | |
PF03134 | PFAM | TB2/DP1, HVA22 family | JGI | ISS | |
UniRef100_Q6NLY8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: HVA22-like protein k n=1 Tax=Arabidopsis thaliana RepID=HA22K_ARATH | SoyBase | E_val: 5.00E-42 | ISS |
UniRef100_UPI000233DEDC | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233DEDC related cluster n=1 Tax=unknown RepID=UPI000233DEDC | SoyBase | E_val: 4.00E-98 | ISS |
Glyma19g02871 not represented in the dataset |
Glyma19g02871 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.19g024600 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g02871.1 sequence type=CDS gene model=Glyma19g02871 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTCGCTCGGCATGGTGGATTCAAGTGGCAAAGAGTCAACAAGCTATGCAATGAGGTCAGGGAGTTCGGCGCCGATCTCATCGAGGTCGATGAGCTCGCCTCCGTCTACGATCTCATCGGCGCCGATCTCATCGACGACATTTACCAGAGGTGGTTCGTTGGATTGAGGCTTCTCCTTTCACCCGTTACTTCCAACCTTCTTCTCCGCACAACATGCTGTTCTATAGGGCTTGCGCTTCCCGTGTATTCCACGTTTAAAGCTATTGAGAACAATGACCCATATGAGCAACAAAGGTGCCTATTGTATTGGGCAGCTTATGGTTCTTTTAGTGCTGCAGAAATGTTTGCTGAAAAATTATTTTCCTGGATTCCACTCTATTATCACATGAAGTTTGCATTTCTTGTTTGGCTACAGCTGCCCACTCTTGATGTAAGCTTAACCAAATTGCTGCACTTATTCACTTCCTGCTATGCTTTCTGA
>Glyma19g02871.1 sequence type=predicted peptide gene model=Glyma19g02871 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFARHGGFKWQRVNKLCNEVREFGADLIEVDELASVYDLIGADLIDDIYQRWFVGLRLLLSPVTSNLLLRTTCCSIGLALPVYSTFKAIENNDPYEQQRCLLYWAAYGSFSAAEMFAEKLFSWIPLYYHMKFAFLVWLQLPTLDVSLTKLLHLFTSCYAF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||