Report for Sequence Feature Glyma19g02730
Feature Type: gene_model
Chromosome: Gm19
Start: 2672549
stop: 2677567
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g02730
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G15080 AT
Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr5:4886414-4888555 FORWARD LENGTH=493
SoyBase E_val: 5.00E-157 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006499 GO-bp
Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF661 Panther
JGI ISS
PF07714 PFAM
Protein tyrosine kinase
JGI ISS
UniRef100_B9S2B9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9S2B9_RICCO
SoyBase E_val: 7.00E-160 ISS
UniRef100_UPI000233DED8 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233DED8 related cluster n=1 Tax=unknown RepID=UPI000233DED8
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g02730
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma19g02730 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g023500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g02730
Coding sequences of Glyma19g02730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g02730.2 sequence type=CDS gene model=Glyma19g02730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGACCACAAGTGGTGCTGGTAATAGGATTGGTTATAGGAGTGCAAGAAGATTCAAGGGGGAGAGAAATAAAGATGTCACCTACGAAGAAGGCTCAAATTTTTTGAAGAAATTGAAGATTTTCCTAGGCTGCATGTTTTTTAGTTCAAAACAGGAAGACTCGAGGAGTGACAAGAGCAGACAGGGAAGAAATGTTACAAATGATTTGGTTAGACACCAACCAGTTACCCAAAGATCCTTATCCACCAAAAGGTCAAAAAGATCCTCAGCCACCAACTTAAGCCAGGAAATAATCCAAGCTTCTTCCCTTCGAAGATTCACCTTTAATGATCTTAAGTTGGCAACAAGAAATTTTGAGTCTAAGAATCTTCTTGGTGAGGGGGGTTTTGGAACTGTGTTGAAAGGTTGGGTCAATGAGCATGAGAACTTTGCAGCACGACCTGGAACAGGGACTCCAGTTGCAGTGAAGACTCTCAACCCAAATGGATTTCAAGGTCATAAAGAATGGCTTGCTGAAATTAATTATCTTAGTGAGCTCCATCATCCAAATCTGGTTAGATTGGTTGGCTATTGCATCGAAGATGCTAAAAGGTTACTAGTATATGAGTATATGTCTCAAGGAAGCTTAGACAACCATTTGTTCAAGACGGCAACTAAGCACCTTACATGGCCTATCAGAATGAAAATTGCAATTGGTGCTGCTAATGCCCTTGCATTTTTGCATGAGGAAGCTTCAAGGCCAGTAATATTCCGAGATTTCAAGACATCTAATGTCCTATTGGATGAGGACTACAATGCAAAACTTTCTGACTTTGGGCTTGCCCAAGATGCTCCAGTGGGAGATAAAACTCATGTTTCCACTGAAGTAATGGGAACACAAGGCTATGCAGCCCCTGAGTATGTGATGACGGGACACCTTACTTCCAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTACTTGAAATGCTGACAGGAAGAAGAGCCGTGGATCAAAGAGTTCCTAGGAAGGAGCAAAACTTGGTGGAATGGTTGCGTCCTCGTCTTAGGGAGAAAGATAATTTTCACTATCTAATGGATCCAAGACTTGGAGGTCAATACCCAATGAAAAGTGCTCGTAGGGCATTGTGGTTGGCCACTCACTGTATTCGTCATAACCCTAAATCAAGACCCCTTATGAGTGAAGTGGTTCGTGAGTTGAAATCTTTGCCTCTTTTTCGTGATGATGATGACATG
Predicted protein sequences of Glyma19g02730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g02730.2 sequence type=predicted peptide gene model=Glyma19g02730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
METTSGAGNRIGYRSARRFKGERNKDVTYEEGSNFLKKLKIFLGCMFFSSKQEDSRSDKSRQGRNVTNDLVRHQPVTQRSLSTKRSKRSSATNLSQEIIQASSLRRFTFNDLKLATRNFESKNLLGEGGFGTVLKGWVNEHENFAARPGTGTPVAVKTLNPNGFQGHKEWLAEINYLSELHHPNLVRLVGYCIEDAKRLLVYEYMSQGSLDNHLFKTATKHLTWPIRMKIAIGAANALAFLHEEASRPVIFRDFKTSNVLLDEDYNAKLSDFGLAQDAPVGDKTHVSTEVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAVDQRVPRKEQNLVEWLRPRLREKDNFHYLMDPRLGGQYPMKSARRALWLATHCIRHNPKSRPLMSEVVRELKSLPLFRDDDDM