Glyma19g02705 - SoyBase

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Report for Sequence Feature Glyma19g02705

Feature Type:	gene_model
Chromosome:	Gm19
Start:	2641188
stop:	2641682
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma19g02705

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF04434	PFAM	SWIM zinc finger	JGI		ISS
UniRef100_D3YBC6	UniRef	Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Trifolium repens RepID=D3YBC6_TRIRP	SoyBase	E_val: 3.00E-23	ISS
UniRef100_G7IFE9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Receptor-like protein kinase HSL1 n=1 Tax=Medicago truncatula RepID=G7IFE9_MEDTR	SoyBase	E_val: 6.00E-16	ISS

Expression Patterns of Glyma19g02705

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g02705 not represented in the dataset	Glyma19g02705 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma19g02705 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.19g023100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma19g02705

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma19g02705

Limit To All Plant Sequences

>Glyma19g02705.1   sequence type=CDS   gene model=Glyma19g02705   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATCACCAATGTTATTGAGTCAATTAATTCGGTACTAATAAAAACACGAAATCTGCCAATAAGTGCGCTGGTAAAATCAACCTATATAGGATATAATGCATTGTTCAACCAAAGTGGGAGAGAAGTCGCATTAATGATTACGTATGGCCAAGTTTATACACAATTCTTAGTCCAGCAGACAATTAACCCGAGAGAGGTTCTACTCACTGGAAATTTCAGGATCAGGGTAGATGAAAGGTGGTGTGACTGTGACAAATTCCAAAAAATTCATGTGCGTTGTTCTCATGTTGTTGCTGCTTGTAAGCATGCTCATCACGAGTGTAAGAACTACAAACATCATGCGTATACACTGGAAAGTGTGTCCAACATGTACATAGGATTGTTTAGGGGATTGTGCAACGAAGCATATTGA

Predicted protein sequences of Glyma19g02705

Limit To All Plant Sequences

>Glyma19g02705.1   sequence type=predicted peptide   gene model=Glyma19g02705   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MITNVIESINSVLIKTRNLPISALVKSTYIGYNALFNQSGREVALMITYGQVYTQFLVQQTINPREVLLTGNFRIRVDERWCDCDKFQKIHVRCSHVVAACKHAHHECKNYKHHAYTLESVSNMYIGLFRGLCNEAY*

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