Report for Sequence Feature Glyma19g02670
Feature Type: gene_model
Chromosome: Gm19
Start: 2536353
stop: 2540976
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g02670
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G36930 AT
Annotation by Michelle Graham. TAIR10: Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191
SoyBase E_val: 4.00E-152 ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0005622 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: intracellular
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0043531 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ADP binding
SoyBase N/A ISS
KOG1947
KOG
Leucine rich repeat proteins, some proteins contain F-box
JGI ISS
PTHR11017 Panther
LEUCINE RICH REPEAT PROTEIN
JGI ISS
PTHR11017:SF20 Panther
DISEASE RESISTANCE PROTEIN
JGI ISS
PF00560 PFAM
Leucine Rich Repeat
JGI ISS
PF00931 PFAM
NB-ARC domain
JGI ISS
PF01582 PFAM
TIR domain
JGI ISS
UniRef100_D6PT14 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Rj2 protein n=1 Tax=Glycine max RepID=D6PT14_SOYBN
SoyBase E_val: 0 ISS
UniRef100_UPI000233DED5 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233DED5 related cluster n=1 Tax=unknown RepID=UPI000233DED5
SoyBase E_val: 0 ISS
Expression Patterns of Glyma19g02670
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma19g02670 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g022700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g02670
Coding sequences of Glyma19g02670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g02670.1 sequence type=CDS gene model=Glyma19g02670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTGCAATATCATGTTCCTATGTATTCACCTATGATGTGTTCCTTAGCTTCAGAGGCTCAGACACACGCCATGGTTTTGTTGGCAATCTCTACAAAGCTCTTAATGACAAGGGAATCCACACTTTCATTGATGATGAGAAGCTTCAGGGAGGAGAGGAAATAACACCAACACTTATGAAAGCAATTGAGGAGTCCCAGATTGCCATCACTGTGCTCTCTCACAACTATGCTTCTTCCTCATTTTGTTTGGATGAACTTGTTCACATCATTGATTGTAAGAGGAAAGGTTTGCTGGTTTTGCCGGTTTTTTATAACTTGGATCCTTCTGATGTGAGACACCAGAAAGGTAGTTATGGAGAAGCATTGGCTAGGCATGAGGAAAGGTTCAAAGCTAAGAAGGAGAGGTTGAACCAAAACATGGAGAGGTTGGAGAAATGGAAGATGGCTTTGCATCAAGTAGCTAATTTGTCTGGATATCATTTCAAACAAGGAGATGGATATGAATACGAGTTTATTGGGAAGATTGTTGAAATGGTTTCTGGCAAGACTAACCGGGCTCTTTTACATATTGCGGATTATCCGGTTGGGCTAGAGTCACAAGTATTAGAAGTAGTGAAACTTTTGGATGTTGGAGCTAATGATGGTGTCCACATGATAGGGATCCATGGAATTGGTGGGATAGGAAAAACAACACTTGCTCTAGCAGTTTATAATTATGTTGCTGACCATTTTGATGGTTCGTGTTTTCTTGAAAACGTGAGAGAAAATTCAGACAAACATGGGTTACAACATCTCCAAAGCATCATTCTTTCTGAATTGGTTAAAGAAAATAAAATGAACATAGCAACTGTGAAACAAGGAATTTCAATGATACAACATAGGCTCCAGCGAAAAAAGGTTCTCTTGATTGTAGATGATGTTGATAAGCCTGAGCAATTGCAGGCTATTGTTGGAAGACCTGATTGGTTTGGTTCTGGCAGTAGAATCATCATCACGACGCGCGACGAAAAACTGCTGGCATCTCATGAGGTTAGAAGAACATATGAGGTGAATGAATTGAACAGGAATGATGCTCTTCAATTGCTCACATGGGAAGCTTTTAAAATGCAAAAAGTTGATCCAAGTTATGAGGAGATGTTGAATCGTGTGGTAACTTATGCTTCTGGCCTTCCATTGGCTTTGAAAGTAATAGGTTCCAACTTGTTTGGAAAAAGTATACAAGAATGGAAATCTGCTATCAATCAATACCAAAGAATTCCTAATAACCAAATCTTAAAGATACTCAAAGTAAGTTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATGTGAATTGGAAGAGGTTGAAGATATACTTCATGCTCATTATGGAGACTGCATGAAATATCATATTGGGGTGCTGATTGATAAATCCCTCTTAAAGCTTAGTGTGCATGGTACAATGGTGACATTGCATGACTTGATAGAGGACATGGGTAGAGAAATTGTACGACAGGAGTCACCAAAAGATCCAGGGAAGCGCAGTAGATTATGGTTCCATGAGGATATAATTCAAGTTTTAGAAGATAACACAGGAACAAGTGAAATTGAAATCATATGTCTGAATTTCCCCTTACTTGACAAAGAAGATATAGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAAAAACCTCAAAACTCTGATTATTAAAAGTGGTCATTTTTGCAAAGGTCCCAGGTATCTTCCAAATAGTCTAAGAGTATTGGAATGGTGGAGATATCCTTCACATGATTTACCATCTGATTTTCGTTCAAAGAAACTTGGCATATGCAAGTTACCCCATTGTTGTTTTACATCACTTGAGTTGGTTGGCTTTTTAACGAAATTTATGAGTATGAGAGTTTTGAATTTGGACAAATGCAAATGTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAAAAACTTTCATTTCAACACTGTCAAAATTTAACTACAATTCACAGTTCAATTGGATTTCTATATAAACTTAAAATATTGAGTGCTTTTGGTTGCACCAAGCTTGTGAGTTTTCCACCCATCAAGTTGACCTCTCTTGAAAAACTCAATCTCTCGCGTTGTCATAGTCTTGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAACATAAGGGAACTTCAGTGTGAATACACTTCCATAAAAGAATTGCCATCTTCAATTCATAATCTTACCCGACTTCAAGAATTACAACTGGCTAACTGTGGAGTTGTTCAGTTACCAAGTAGCATTGTAATGATGCCAGAACTTACTGAACTTATTGGTTGGAAATGGAAAGGGTGGCAATGGCTAAAACAGGAAGAGGGTGAAGAAAAATTTGGATCATCAATAGTATCTTCAAAGGTAGAATTGCTTTGGGCCTCAGATTGCAACCTGTATGATGATTTCTTTTCAATAGGTTTCACGCGGTTTGCTCATGTGAAAGATTTAAACCTATCAAAGAATAATTTCACAATGCTTCCTGAATGCATCAAAGAATTTCAGTTTTTAAGGAAGCTTAATGTGAATGACTGCAAGCATCTTCAGGAAATTAGAGGCATTCCACCTAGCTTAAAACATTTCTTAGCAACAAACTGTAAATCCTTGACTTCCTCAAGTACAAGCATGTTCCTGAATCAGGAACTGCATGAGACTGGAAAAACTCAGTTTTATTTGCCAGGAGAAAGGATTCCAGAGTGGTTTGATCACCAAAGTAGGGGACCTTCAATTTCTTTCTGGTTTCGCAATAAGTTCCCCGGCAAAGTTCTTTGTCTTGTTATTGGACCTATGGATGATGACTCTGGAATGTTAATATCTAAGGTGATCATCAATGGCAATAAATATTTCCGTGGTAGTGGTTATTTCATGATGGGAATGGATCATACATATCTTTTTGATCTTCAAATAATGGAATTTGAAGATAATTTGTATGTACCTTTAGAAAATGAATGGAACCATGCGGAGGTTACATATGAGGGTTTGGAAGAGACCTCAACCCCTAAAGAATGCGGAATCCATGTATTCAAACAGGAAAGTAGCATGAAGGATATTCGATTTGCTGATCCTTATGGCAAGAGAAAATTAGGCAATGATCGCAACAGTTTGGAATCACAAAACCAACAATTGCTAAAAAAACATAGGTTTGTGGACATGGAAGTTTCATAG
Predicted protein sequences of Glyma19g02670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g02670.1 sequence type=predicted peptide gene model=Glyma19g02670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAAISCSYVFTYDVFLSFRGSDTRHGFVGNLYKALNDKGIHTFIDDEKLQGGEEITPTLMKAIEESQIAITVLSHNYASSSFCLDELVHIIDCKRKGLLVLPVFYNLDPSDVRHQKGSYGEALARHEERFKAKKERLNQNMERLEKWKMALHQVANLSGYHFKQGDGYEYEFIGKIVEMVSGKTNRALLHIADYPVGLESQVLEVVKLLDVGANDGVHMIGIHGIGGIGKTTLALAVYNYVADHFDGSCFLENVRENSDKHGLQHLQSIILSELVKENKMNIATVKQGISMIQHRLQRKKVLLIVDDVDKPEQLQAIVGRPDWFGSGSRIIITTRDEKLLASHEVRRTYEVNELNRNDALQLLTWEAFKMQKVDPSYEEMLNRVVTYASGLPLALKVIGSNLFGKSIQEWKSAINQYQRIPNNQILKILKVSFDALEEEEKSVFLDIACCFKGCELEEVEDILHAHYGDCMKYHIGVLIDKSLLKLSVHGTMVTLHDLIEDMGREIVRQESPKDPGKRSRLWFHEDIIQVLEDNTGTSEIEIICLNFPLLDKEDIVEWNRKAFKKMKNLKTLIIKSGHFCKGPRYLPNSLRVLEWWRYPSHDLPSDFRSKKLGICKLPHCCFTSLELVGFLTKFMSMRVLNLDKCKCLTQIPDVSGLPNLEKLSFQHCQNLTTIHSSIGFLYKLKILSAFGCTKLVSFPPIKLTSLEKLNLSRCHSLESFPEILGKMENIRELQCEYTSIKELPSSIHNLTRLQELQLANCGVVQLPSSIVMMPELTELIGWKWKGWQWLKQEEGEEKFGSSIVSSKVELLWASDCNLYDDFFSIGFTRFAHVKDLNLSKNNFTMLPECIKEFQFLRKLNVNDCKHLQEIRGIPPSLKHFLATNCKSLTSSSTSMFLNQELHETGKTQFYLPGERIPEWFDHQSRGPSISFWFRNKFPGKVLCLVIGPMDDDSGMLISKVIINGNKYFRGSGYFMMGMDHTYLFDLQIMEFEDNLYVPLENEWNHAEVTYEGLEETSTPKECGIHVFKQESSMKDIRFADPYGKRKLGNDRNSLESQNQQLLKKHRFVDMEVS*