|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G23440 | AT | Annotation by Michelle Graham. TAIR10: Peptidase C15, pyroglutamyl peptidase I-like | chr1:8321940-8322224 FORWARD LENGTH=94 | SoyBase | E_val: 3.00E-25 | ISS |
GO:0006508 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteolysis | SoyBase | N/A | ISS |
GO:0006635 | GO-bp | Annotation by Michelle Graham. GO Biological Process: fatty acid beta-oxidation | SoyBase | N/A | ISS |
GO:0046482 | GO-bp | Annotation by Michelle Graham. GO Biological Process: para-aminobenzoic acid metabolic process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0008233 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: peptidase activity | SoyBase | N/A | ISS |
PTHR13856 | Panther | VHS DOMAIN CONTAINING PROTEIN FAMILY | JGI | ISS | |
PTHR13856:SF27 | Panther | TARGET OF MYB1 RELATED (TOM1 - RELATED) | JGI | ISS | |
PF00790 | PFAM | VHS domain | JGI | ISS | |
UniRef100_G7IAA6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Pyrrolidone-carboxylate peptidase n=1 Tax=Medicago truncatula RepID=G7IAA6_MEDTR | SoyBase | E_val: 6.00E-37 | ISS |
UniRef100_UPI000233F323 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233F323 related cluster n=1 Tax=unknown RepID=UPI000233F323 | SoyBase | E_val: 7.00E-71 | ISS |
Glyma19g01821 not represented in the dataset |
Glyma19g01821 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.19g014900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g01821.1 sequence type=CDS gene model=Glyma19g01821 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTGAATTCCATGGTGGAACGCGCCACGGGCGACATGCTCATAGGGCCTGATTGGGCCATGAACATCAAGATCTGCGACATGCTCAATCATGACCCTGGTTGTTATGTTTTTACTACAACAACGACAACAATTCATGTGACAGGATTTAAGAAATTGCATGGAGTTTCAAAGAATCCAACAGAGACAATTGCCAATAATTTGACAGAGTACATGAATAAGAAGGGTTTGCCAAAGGGATTAGTTATTGGGAGCTCCAGCATTCTTGAGATTGCTGGTCAAGGAGCACTTGTGCCATTGTACCAGAGATTACAATCCAGCGTTATTGCCAAGGACTCTGAATCTTCAAATTCCAATAAAATTATTTGGGTGAGTTGCCCCTGTACTTGA
>Glyma19g01821.1 sequence type=predicted peptide gene model=Glyma19g01821 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVNSMVERATGDMLIGPDWAMNIKICDMLNHDPGCYVFTTTTTTIHVTGFKKLHGVSKNPTETIANNLTEYMNKKGLPKGLVIGSSSILEIAGQGALVPLYQRLQSSVIAKDSESSNSNKIIWVSCPCT*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||