Report for Sequence Feature Glyma19g00661
Feature Type: gene_model
Chromosome: Gm19
Start: 420960
stop: 422883
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma19g00661
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G14470 AT
Annotation by Michelle Graham. TAIR10: GHMP kinase family protein | chr5:4663029-4664657 REVERSE LENGTH=366
SoyBase E_val: 3.00E-11 ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0004335 GO-mf
Annotation by Michelle Graham. GO Molecular Function: galactokinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016773 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphotransferase activity, alcohol group as acceptor
SoyBase N/A ISS
UniRef100_B9S667 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S667_RICCO
SoyBase E_val: 2.00E-09 ISS
UniRef100_I1N5L1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N5L1_SOYBN
SoyBase E_val: 7.00E-33 ISS
Expression Patterns of Glyma19g00661
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma19g00661
Paralog Evidence Comments
Glyma05g09130 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma19g00661 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.19g002700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma19g00661
Transcripts of Glyma19g00661
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g00661.2 sequence type=transcript gene model=Glyma19g00661 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTTAAAGTTTGTTTGATTATGATATCTATATATATAGGGAGGGTGATGGGGGAGATAGAGAAGAGAGGAGAAAGCAATGGGCATTGATAGTGATTCTGTGATATCTCACAAGGCGTATGCGAGGGTGGGTTTGCTCGGAAATCCAAGCGATGTGTATTACGGCAAAACGATATCGTTTAGCGTCGCCAACTTCTGCTCCACCGTCACGCTTGGTCCCTCCGACGAGCCCCTCCACGATCTTCGCGACCACAATTTCACTCCCTCCTACGCCATCAATATTCCTCGCCAGGTTAATGTTTGGAGGTGATGCCCTCGGGGATTTGAACCTAAAAATGGTAGAGGTTGCTAGACAGGTTGGAGCTGCATCAAAATTTACTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTTTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAATCTGTTTGAGGGTTTGAAAAATAGTTCTCAACAAAATAAAATTTTCATTCACTTAAGACGAGTTATAGATTATTCAATCTGCCCACCATTTTCATATGGTGAGCTAGCACACGGGTTTAAAGCTGGTGGGAGTTGGCATACTCAAAGCGCAATGACAGTTTTGTTTTGGTTACAGACAGAATAAACAGCCAAGATTTTAATTATAGAAGGAATTTAGTTTTTTAATGTAAGTTTGTTCCTTTTTGTTGAGAGGGGATCGAACTTGGAAGTTGTTTTTGTTGGCTTTTGATGAGGGTGGATCTGAGAGTTTGGTTTGTGGTATATTTTGGTTTCGTATGTTTATGGTTGGGATTTGGATCATATGGGCGGTGTTATATAGTTTATGTCTAAGCTTTGGGGGTGCTTTTAGCAGCATATATGAGACCTACAGGATACCTTTGTAATTTGCATCGCTTGTCTGGCCAATTTCATACATCTTGTGCGTAAGTTGGTTAGGTTTAATAAGAGAAAAACTCAAAATCTGCCATTTGTTTTTTTGCAAAAAAAGAAAATTATGGATTGACTTTGTTAAATAAGAGCTGCACTTTTTTTTAAAGAGCTTATGTACGGAGATGTATGTTCAACAGTTACTG
Coding sequences of Glyma19g00661
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma19g00661.1 sequence type=CDS gene model=Glyma19g00661 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCGAGGGTGGGTTTGCTCGGAAATCCAAGCGATGTGTATTACGGCAAAACGATATCGTTTAGCGTCGCCAACTTCTGCTCCACCGTCACGCTTGGTCCCTCCGACGAGCCCCTCCACGATCTTCGCGACCACAATTTCACTCCCTCCTACGCCATCAATATTCCTCGCCAGGTTAATGTTTGGAGGTGATGCCCTCGGGGATTTGAACCTAAAAATGGTAGAGGTTGCTAGACAGGTTGGAGCTGCATCAAAATTTACTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTTTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAA
>Glyma19g00661.2 sequence type=CDS gene model=Glyma19g00661 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCGAGGGTGGGTTTGCTCGGAAATCCAAGCGATGTGTATTACGGCAAAACGATATCGTTTAGCGTCGCCAACTTCTGCTCCACCGTCACGCTTGGTCCCTCCGACGAGCCCCTCCACGATCTTCGCGACCACAATTTCACTCCCTCCTACGCCATCAATATTCCTCGCCAGGTTAATGTTTGGAGGTGATGCCCTCGGGGATTTGAACCTAAAAATGGTAGAGGTTGCTAGACAGGTTGGAGCTGCATCAAAATTTACTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTTTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAA
Predicted protein sequences of Glyma19g00661
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma19g00661.1 sequence type=predicted peptide gene model=Glyma19g00661 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRGWVCSEIQAMCITAKRYRLASPTSAPPSRLVPPTSPSTIFATTISLPPTPSIFLARLMFGGDALGDLNLKMVEVARQVGAASKFTQKEGFVILPIEPFPSRLNEIDLKTLQIK*
>Glyma19g00661.2 sequence type=predicted peptide gene model=Glyma19g00661 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRGWVCSEIQAMCITAKRYRLASPTSAPPSRLVPPTSPSTIFATTISLPPTPSIFLARLMFGGDALGDLNLKMVEVARQVGAASKFTQKEGFVILPIEPFPSRLNEIDLKTLQIK*