|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G01550 | AT | Annotation by Michelle Graham. TAIR10: phosphoenolpyruvate (pep)/phosphate translocator 2 | chr3:216947-218856 REVERSE LENGTH=383 | SoyBase | E_val: 5.00E-150 | ISS |
GO:0006810 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transport | SoyBase | N/A | ISS |
GO:0006863 | GO-bp | Annotation by Michelle Graham. GO Biological Process: purine nucleobase transport | SoyBase | N/A | ISS |
GO:0009718 | GO-bp | Annotation by Michelle Graham. GO Biological Process: anthocyanin-containing compound biosynthetic process | SoyBase | N/A | ISS |
GO:0015713 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phosphoglycerate transport | SoyBase | N/A | ISS |
GO:0015714 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phosphoenolpyruvate transport | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0005215 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transporter activity | SoyBase | N/A | ISS |
GO:0015120 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphoglycerate transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015121 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphoenolpyruvate:phosphate antiporter activity | SoyBase | N/A | ISS |
GO:0015297 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: antiporter activity | SoyBase | N/A | ISS |
KOG1441 | KOG | Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter | JGI | ISS | |
PTHR11132 | Panther | SOLUTE CARRIER FAMILY 35 | JGI | ISS | |
PF00892 | PFAM | EamA-like transporter family | JGI | ISS | |
PF03151 | PFAM | Triose-phosphate Transporter family | JGI | ISS | |
UniRef100_G7KHI6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Phosphate/phosphoenolpyruvate translocator n=1 Tax=Medicago truncatula RepID=G7KHI6_MEDTR | SoyBase | E_val: 0 | ISS |
UniRef100_I1N5H8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N5H8_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma19g00270 not represented in the dataset |
Glyma19g00270 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.19g005900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma19g00270.1 sequence type=CDS gene model=Glyma19g00270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCTCCTTATTCTCTCTCTTTGTTAGCCTCTGTCTCCCCCAAAATGCACACCCTTCTTTCTTTCTCCTCATCACACTCTCCACATCTTCCAAACCACAACATAACCAAATCCAATAATAAACTCTCTCATTCCATCAATGGACTTTCATCATGCCCTTCTTCTCCTTTGCTCCCCAGTGCCACAAAATCTTCTCCCTTTCTCATTTCCACTTCAAAAATTGCATCTTTCAGGGTCCTTGCTGCTTCCTCTATACCTGATGCTAGAAGTGATGAACCAGCCAAAACTAGTGATTTCTTAAAAACTCTTCAGCTTGGGGCCATGTTTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGCTTTGCATCGTTGGTTATTAATCTAGTCTGGACTTTGAATCTCCATCCCAGACCAAGCATCAGTGGTTCACAGTTTGCAGCAATCCTTCCACTGGCTGTGGCTCACACAATGGGAAACCTCTTGACCAACATTAGTCTTGGCAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCTATGGAGCCTTTCTTCACTGTAGTTCTTTCTGCCCTTTTACTGGGTGAGATGCCTACTTTCTGGGTGGTTTCTTCCCTTGTACCAGTAGTAGGTGGAGTGGCACTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGATTCACTACTGCTATGGCATCTAACGTTACTAATCAATCGCGGAACGTTTTGAGCAAAAAACTGATGACTAATGAAGAGGAAACTTTGGACAATATCAATCTCTACTCAGTTATAACTATCATTTCCTTTCTGTTGTTGGTCCCATGTGCTATTCTTGTGGAGGGTGTCAAGTTTTCTCCTTCATACTTGCAATCTGCTGCAAGTCAAGGGCTGAATGTCAGAGAGCTATGTGTCAGATCAGTTCTTGCTGCTTTTTGCTTCCATGCATACCAGCAGGTATCATATATGATATTACAGATGGTGTCACCTGTGACCCACTCTGTTGGAAACTGTGTGAAGCGTGTGGTTGTCATTGTTTCTTCAGTTATATTCTTCCAAATTCCTGTCTCACCCGTTAACACACTTGGAACTGGGCTTGCACTTGTTGGAGTTTTCTTGTACTCAAGGGCAAAGAGGATCAAGTCAGTCCAAAAGACAAATTGA
>Glyma19g00270.1 sequence type=predicted peptide gene model=Glyma19g00270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSPYSLSLLASVSPKMHTLLSFSSSHSPHLPNHNITKSNNKLSHSINGLSSCPSSPLLPSATKSSPFLISTSKIASFRVLAASSIPDARSDEPAKTSDFLKTLQLGAMFATWYLLNIYYNIYNKQVLKVYPFPATITAFQFGFASLVINLVWTLNLHPRPSISGSQFAAILPLAVAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSALLLGEMPTFWVVSSLVPVVGGVALASMTEVSFNWIGFTTAMASNVTNQSRNVLSKKLMTNEEETLDNINLYSVITIISFLLLVPCAILVEGVKFSPSYLQSAASQGLNVRELCVRSVLAAFCFHAYQQVSYMILQMVSPVTHSVGNCVKRVVVIVSSVIFFQIPVSPVNTLGTGLALVGVFLYSRAKRIKSVQKTN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||