Glyma19g00260 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Warning: Undefined variable $sxsome in /var/www/html/include/SeqFeatClass.php on line 665

Warning: Undefined variable $sstart in /var/www/html/include/SeqFeatClass.php on line 665

Warning: Undefined variable $send in /var/www/html/include/SeqFeatClass.php on line 665

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean/Absolute/Glyma19g00260): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1019

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean_severin/Absolute/Glyma19g00260): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1021

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1025

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1031

Report for Sequence Feature Glyma19g00260

Feature Type:	gene_model
Chromosome:	Gm19
Start:	70835
stop:	76097
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma19g00260

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G14610	AT	Annotation by Michelle Graham. TAIR10: DEAD box RNA helicase family protein \| chr5:4711271-4714713 FORWARD LENGTH=645	SoyBase	E_val: 0	ISS
GO:0009664	GO-bp	Annotation by Michelle Graham. GO Biological Process: plant-type cell wall organization	SoyBase	N/A	ISS
GO:0042545	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell wall modification	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0003676	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleic acid binding	SoyBase	N/A	ISS
GO:0004386	GO-mf	Annotation by Michelle Graham. GO Molecular Function: helicase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0008026	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP-dependent helicase activity	SoyBase	N/A	ISS
KOG0331	KOG	ATP-dependent RNA helicase	JGI		ISS
PTHR24031	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24031:SF50	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00270	PFAM	DEAD/DEAH box helicase	JGI		ISS
PF00271	PFAM	Helicase conserved C-terminal domain	JGI		ISS
PF00397	PFAM	WW domain	JGI		ISS
UniRef100_G7KHJ1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: DEAD-box ATP-dependent RNA helicase n=1 Tax=Medicago truncatula RepID=G7KHJ1_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI0002339DF6	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002339DF6 related cluster n=1 Tax=unknown RepID=UPI0002339DF6	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma19g00260

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma19g00260 not represented in the dataset	Glyma19g00260 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma19g00260

Paralog	Evidence	Comments
Glyma05g08750	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma19g00260 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.19g006000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma19g00260

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma19g00260

Limit To All Plant Sequences

>Glyma19g00260.2   sequence type=transcript   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ACTTTCTTTCGTTGCATTTTCTCTATTCTTCTTCTTCCTCATACTTTCGTTCCTCATTTTTTCCCAAGCGCGCCGTGAGGCTCTTCGACCCGAAATCCGAACCCGAATTCGGTTTCAATCTCAGAGAGAGAGAGAGAGAGGGAGAGAGAGAAACACTGACCTAGCTCGCAGAATCGACAACCACTTCTCACTCTTCAATCGCATTCCGTAATCGACCAGATCTGAGTGTGAAATCTAAGGCAACTGTGTCTTTGATGGGTCCGAGGTATGCACCACCAGACCCAACACTCCCTAAACCATGGCGGGGTCTTGTGGATGGCAAGACTGGGTATCTTTACTTTTGGAATCCTGAGACTAATGTCACCCAGTATGAGAGGCCATCCTCAAGCTCAGCTTCCCAGTCAAAGTTTTCTTCAGTGCCCAGCTCTTCTGTCCAGGTTCAACAATCATCTCAAGGGTCGCAACGTGGTCGTAGTCCTGATTTCAGTGATAGGTATGATCGAAATGGCACTGGTGGGTCAAACGACGCTGGATCCCGGAACAATCAGAGTTCCAAAGGGGGAAGTTATACTTCTCATGATGTTTCAAATGGAACAAATGTTGCTGGCAATGGTAATTCTTCTGTCAGAGGTCATGGGGCTTCAGATGCTGGAGCTGGACTATCTGCTGAGTCTTATCGACATCGGCATGAAATATCTGTGACTGGAGACAATGTGCCTCCACCGCTTGCATCATTTGGGTCAACTGGCTTTCCATCTGAGCTTCTGAGAGAGGTACAAAATGCTGGGTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCCATTGCTCTTCAAGGTAGAGATATAGTTGCCATTGCTAAAACAGGCTCAGGGAAAACCTTGGGATATTTAATTCCAGCATTTATTCACCTCAAGCGCTCTGGTAATAACTCCAAAATGGGCCCCACTGCATTGGTACTTTCACCAACAAGGGAGTTGGCAACACAGATACAAGATGAAGCCATGAAGTTTGGGAAATCATCTAGAATTTCATGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAACTGAGAGACATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGTCGCTTGAATGATATTCTTGAGATGAGAAGAATTAGTCTTAATCAGGTTTCTTACCTGGTGCTAGATGAGGCAGACAGGATGCTGGATATGGGTTTTGAACCTCAAATTAGGAAAATTGTGAATGAGGTGCCCAATCGCAGGCAAACTCTAATGTTTACTGCAACATGGCCAAAGGAGGTTAGGAAAATTGCAGCTGATCTGCTAGTCAAGCCTGTCCAGGTGAACATTGGGAATGTAGATGAGCTTGTTGCTAACAAGTCTATTACTCAGCATGTTGAAGTATTGCCACCAATGGAGAAACAAAGACGGCTGGAACATATTTTGCGGTCACAGGATCAAGGATCAAAGATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTGACACGTCATTTCGGAGCTGCTGCTATTCATGGGGATAAATCCCAGGCTGAGAGGGATCATGTGTTGAGTCAGTTTCGAACTGGGAGGTCTCCTGTGCTAGTGGCCACAGATGTTGCTGCTCGGGGACTGGATATCAAGGACATTAGGGTGGTTGTCAATTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGAAGGACTGGAAGAGCTGGAGCCACTGGGCTAGCTTACACTTTCTTTGGTGACCAGGATGCTAAATATGCTTCAGATCTCATCAAAGTCTTGGAAGGTGCAAACCAGAAGGTACCTCCAGAACTTCGTGATATGTCATCACGGAGTGGTGGTGGGATGGGTAGATCCAGACGATGGGGTTCTGGGGGACGAGGTGGACATGGTGATTCTGGATATGGTGGAAGGAATAATGACTCTGGATATGGTGGAAGAGGTAATGATGCAGGATATGGTGGAAGAGGCAGTGATTCTAATTATGGAGGGAGGGGGACTGCTGCTTCTGGCAGAGGTGGAGGCCGTGGGTTTGACCATGACTCCCAGAGGAATGATAGGGGTCGGAGCCCAGACAAGGGATCTAGTTGGAGTGATCGCTTCAAAAGCGTCAACCGGGATCGCAGTCGTAGTCCTGACAGGGCTGCACTACCTCAACATTCCCAAGGTGGCAGCTTTCACAAGGCAATGATGGAACGTGGTGGTGGTGGTGGTGATCGCAATAAGAGCTTTAACCGGGACCGAAGCCGCAGTCCTAGCCCTCATAGACAGGAGAAGTGCCCAGCGGTTCGAGATCGTTCCCCAGTTTACAGTTTTCATCAATCAATGATGGGACGAGGTCAGTCATCCCCTTCATCTCAACGGCAGCGTGCACGCAGTCCTCACCGAAACTCACCCCCCTCCCAGGGTGATGGAAGATATGCTGGATCTCATTCATCTTACAATGGAGAAGTGGAGGAAGGGATGATTCCCGAGGAAGAAGGAATGATTGGTCAAGATGATCCCGTAAATGTCAATTAGGATTTTGGCTATCCTGAGACCATTTACATATAAATATGCCAAGGTTGTTTTGGTCTTCTTACATAATGTGGAAGGGGATTGTTATTTGAACACGAGCAAGTTAGGATATGGTAGTGGAATTCATGGCAAATGTATATTTTGAGGGGCTTTGTAGAAGCCTGGAAATGGCATAGATGAACCTAGTAAGTAAAGAATATTGTGGGTTTTGTTTGTTATTTTTGGTAAAACTCGACTTTATATGGAGACGGGTTCTTTGTTCCCATACAATCAAAAAAGAAATTATTCAGCTACTATAATTAAAATGTTGTATTCCTCCACTTTTCTGAGTGGCAGCATGTAAGCTCTCTTGGGTCATCATATGTTGCCGTCTGCTGCTACAGCCTTCTGTTTTAATTGAGATTTTCTTTAACATGACTCAGAGAATGCATGATA

>Glyma19g00260.3   sequence type=transcript   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ACTTTCTTTCGTTGCATTTTCTCTATTCTTCTTCTTCCTCATACTTTCGTTCCTCATTTTTTCCCAAGCGCGCCGTGAGGCTCTTCGACCCGAAATCCGAACCCGAATTCGGTTTCAATCTCAGAGAGAGAGAGAGAGAGGGAGAGAGAGAAACACTGACCTAGCTCGCAGAATCGACAACCACTTCTCACTCTTCAATCGCAACTGTGTCTTTGATGGGTCCGAGGTATGCACCACCAGACCCAACACTCCCTAAACCATGGCGGGGTCTTGTGGATGGCAAGACTGGGTATCTTTACTTTTGGAATCCTGAGACTAATGTCACCCAGTATGAGAGGCCATCCTCAAGCTCAGCTTCCCAGTCAAAGTTTTCTTCAGTGCCCAGCTCTTCTGTCCAGGTTCAACAATCATCTCAAGGGTCGCAACGTGGTCGTAGTCCTGATTTCAGTGATAGGTATGATCGAAATGGCACTGGTGGGTCAAACGACGCTGGATCCCGGAACAATCAGAGTTCCAAAGGGGGAAGTTATACTTCTCATGATGTTTCAAATGGAACAAATGTTGCTGGCAATGGTAATTCTTCTGTCAGAGGTCATGGGGCTTCAGATGCTGGAGCTGGACTATCTGCTGAGTCTTATCGACATCGGCATGAAATATCTGTGACTGGAGACAATGTGCCTCCACCGCTTGCATCATTTGGGTCAACTGGCTTTCCATCTGAGCTTCTGAGAGAGGTACAAAATGCTGGGTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCCATTGCTCTTCAAGGTAGAGATATAGTTGCCATTGCTAAAACAGGCTCAGGGAAAACCTTGGGATATTTAATTCCAGCATTTATTCACCTCAAGCGCTCTGGTAATAACTCCAAAATGGGCCCCACTGCATTGGTACTTTCACCAACAAGGGAGTTGGCAACACAGATACAAGATGAAGCCATGAAGTTTGGGAAATCATCTAGAATTTCATGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAACTGAGAGACATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGTCGCTTGAATGATATTCTTGAGATGAGAAGAATTAGTCTTAATCAGGTTTCTTACCTGGTGCTAGATGAGGCAGACAGGATGCTGGATATGGGTTTTGAACCTCAAATTAGGAAAATTGTGAATGAGGTGCCCAATCGCAGGCAAACTCTAATGTTTACTGCAACATGGCCAAAGGAGGTTAGGAAAATTGCAGCTGATCTGCTAGTCAAGCCTGTCCAGGTGAACATTGGGAATGTAGATGAGCTTGTTGCTAACAAGTCTATTACTCAGCATGTTGAAGTATTGCCACCAATGGAGAAACAAAGACGGCTGGAACATATTTTGCGGTCACAGGATCAAGGATCAAAGATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTGACACGTCATTTCGGAGCTGCTGCTATTCATGGGGATAAATCCCAGGCTGAGAGGGATCATGTGTTGAGTCAGTTTCGAACTGGGAGGTCTCCTGTGCTAGTGGCCACAGATGTTGCTGCTCGGGGACTGGATATCAAGGACATTAGGGTGGTTGTCAATTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGAAGGACTGGAAGAGCTGGAGCCACTGGGCTAGCTTACACTTTCTTTGGTGACCAGGATGCTAAATATGCTTCAGATCTCATCAAAGTCTTGGAAGGTGCAAACCAGAAGGTACCTCCAGAACTTCGTGATATGTCATCACGGAGTGGTGGTGGGATGGGTAGATCCAGACGATGGGGTTCTGGGGGACGAGGTGGACATGGTGATTCTGGATATGGTGGAAGGAATAATGACTCTGGATATGGTGGAAGAGGTAATGATGCAGGATATGGTGGAAGAGGCAGTGATTCTAATTATGGAGGGAGGGGGACTGCTGCTTCTGGCAGAGGTGGAGGCCGTGGGTTTGACCATGACTCCCAGAGGAATGATAGGGGTCGGAGCCCAGACAAGGGATCTAGTTGGAGTGATCGCTTCAAAAGCGTCAACCGGGATCGCAGTCGTAGTCCTGACAGGGCTGCACTACCTCAACATTCCCAAGGTGGCAGCTTTCACAAGGCAATGATGGAACGTGGTGGTGGTGGTGGTGATCGCAATAAGAGCTTTAACCGGGACCGAAGCCGCAGTCCTAGCCCTCATAGACAGGAGAAGTGCCCAGCGGTTCGAGATCGTTCCCCAGTTTACAGTTTTCATCAATCAATGATGGGACGAGGTCAGTCATCCCCTTCATCTCAACGGCAGCGTGCACGCAGTCCTCACCGAAACTCACCCCCCTCCCAGGGTGATGGAAGATATGCTGGATCTCATTCATCTTACAATGGAGAAGTGGAGGAAGGGATGATTCCCGAGGAAGAAGGAATGATTGGTCAAGATGATCCCGTAAATGTCAATTAGGATTTTGGCTATCCTGAGACCATTTACATATAAATATGCCAAGGTTGTTTTGGTCTTCTTACATAATGTGGAAGGGGATTGTTATTTGAACACGAGCAAGTTAGGATATGGTAGTGGAATTCATGGCAAATGTATATTTTGAGGGGCTTTGTAGAAGCCTGGAAATGGCATAGATGAACCTAGTAAGTAAAGAATATTGTGGGTTTTGTTTGTTATTTTTGGTAAAACTCGACTTTATATGGAGACGGGTTCTTTGTTCCCATACAATCAAAAAAGAAATTATTCAGCTACTATAATTAAAATGTTGTATTCCTCCACTTTTCTGAGTGGCAGCATGTAAGCTCTCTTGGGTCATCATATGTTGCCGTCTGCTGCTACAGCCTTCTGTTTTAATTGAGATTTTCTTTAACATGACTCAGAGAATGCATGATA

Coding sequences of Glyma19g00260

Limit To All Plant Sequences

>Glyma19g00260.1   sequence type=CDS   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTGCCACAGCAACTGTGTCTTTGATGGGTCCGAGGTATGCACCACCAGACCCAACACTCCCTAAACCATGGCGGGGTCTTGTGGATGGCAAGACTGGGTATCTTTACTTTTGGAATCCTGAGACTAATGTCACCCAGTATGAGAGGCCATCCTCAAGCTCAGCTTCCCAGTCAAAGTTTTCTTCAGTGCCCAGCTCTTCTGTCCAGGTTCAACAATCATCTCAAGGGTCGCAACGTGGTCGTAGTCCTGATTTCAGTGATAGGTATGATCGAAATGGCACTGGTGGGTCAAACGACGCTGGATCCCGGAACAATCAGAGTTCCAAAGGGGGAAGTTATACTTCTCATGATGTTTCAAATGGAACAAATGTTGCTGGCAATGGTAATTCTTCTGTCAGAGGTCATGGGGCTTCAGATGCTGGAGCTGGACTATCTGCTGAGTCTTATCGACATCGGCATGAAATATCTGTGACTGGAGACAATGTGCCTCCACCGCTTGCATCATTTGGGTCAACTGGCTTTCCATCTGAGCTTCTGAGAGAGGTACAAAATGCTGGGTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCCATTGCTCTTCAAGGTAGAGATATAGTTGCCATTGCTAAAACAGGCTCAGGGAAAACCTTGGGATATTTAATTCCAGCATTTATTCACCTCAAGCGCTCTGGTAATAACTCCAAAATGGGCCCCACTGCATTGGTACTTTCACCAACAAGGGAGTTGGCAACACAGATACAAGATGAAGCCATGAAGTTTGGGAAATCATCTAGAATTTCATGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAACTGAGAGACATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGTCGCTTGAATGATATTCTTGAGATGAGAAGAATTAGTCTTAATCAGGTTTCTTACCTGGTGCTAGATGAGGCAGACAGGATGCTGGATATGGGTTTTGAACCTCAAATTAGGAAAATTGTGAATGAGGTGCCCAATCGCAGGCAAACTCTAATGTTTACTGCAACATGGCCAAAGGAGGTTAGGAAAATTGCAGCTGATCTGCTAGTCAAGCCTGTCCAGGTGAACATTGGGAATGTAGATGAGCTTGTTGCTAACAAGTCTATTACTCAGCATGTTGAAGTATTGCCACCAATGGAGAAACAAAGACGGCTGGAACATATTTTGCGGTCACAGGATCAAGGATCAAAGATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTGACACGTCATTTCGGAGCTGCTGCTATTCATGGGGATAAATCCCAGGCTGAGAGGGATCATGTGTTGAGTCAGTTTCGAACTGGGAGGTCTCCTGTGCTAGTGGCCACAGATGTTGCTGCTCGGGGACTGGATATCAAGGACATTAGGGTGGTTGTCAATTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGAAGGACTGGAAGAGCTGGAGCCACTGGGCTAGCTTACACTTTCTTTGGTGACCAGGATGCTAAATATGCTTCAGATCTCATCAAAGTCTTGGAAGGTGCAAACCAGAAGGTACCTCCAGAACTTCGTGATATGTCATCACGGAGTGGTGGTGGGATGGGTAGATCCAGACGATGGGGTTCTGGGGGACGAGGTGGACATGGTGATTCTGGATATGGTGGAAGGAATAATGACTCTGGATATGGTGGAAGAGGTAATGATGCAGGATATGGTGGAAGAGGCAGTGATTCTAATTATGGAGGGAGGGGGACTGCTGCTTCTGGCAGAGGTGGAGGCCGTGGGTTTGACCATGACTCCCAGAGGAATGATAGGGGTCGGAGCCCAGACAAGGGATCTAGTTGGAGTGATCGCTTCAAAAGCGTCAACCGGGATCGCAGTCGTAGTCCTGACAGGGCTGCACTACCTCAACATTCCCAAGGTGGCAGCTTTCACAAGGCAATGATGGAACGTGGTGGTGGTGGTGGTGATCGCAATAAGAGCTTTAACCGGGACCGAAGCCGCAGTCCTAGCCCTCATAGACAGGAGAAGTGCCCAGCGGTTCGAGATCGTTCCCCAGTTTACAGTTTTCATCAATCAATGATGGGACGAGGTCAGTCATCCCCTTCATCTCAACGGCAGCGTGCACGCAGTCCTCACCGAAACTCACCCCCCTCCCAGGGTGATGGAAGATATGCTGGATCTCATTCATCTTACAATGGAGAAGTGGAGGAAGGGATGATTCCCGAGGAAGAAGGAATGATTGGTCAAGATGATCCCGTAAATGTCAATTAG

>Glyma19g00260.2   sequence type=CDS   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTCCGAGGTATGCACCACCAGACCCAACACTCCCTAAACCATGGCGGGGTCTTGTGGATGGCAAGACTGGGTATCTTTACTTTTGGAATCCTGAGACTAATGTCACCCAGTATGAGAGGCCATCCTCAAGCTCAGCTTCCCAGTCAAAGTTTTCTTCAGTGCCCAGCTCTTCTGTCCAGGTTCAACAATCATCTCAAGGGTCGCAACGTGGTCGTAGTCCTGATTTCAGTGATAGGTATGATCGAAATGGCACTGGTGGGTCAAACGACGCTGGATCCCGGAACAATCAGAGTTCCAAAGGGGGAAGTTATACTTCTCATGATGTTTCAAATGGAACAAATGTTGCTGGCAATGGTAATTCTTCTGTCAGAGGTCATGGGGCTTCAGATGCTGGAGCTGGACTATCTGCTGAGTCTTATCGACATCGGCATGAAATATCTGTGACTGGAGACAATGTGCCTCCACCGCTTGCATCATTTGGGTCAACTGGCTTTCCATCTGAGCTTCTGAGAGAGGTACAAAATGCTGGGTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCCATTGCTCTTCAAGGTAGAGATATAGTTGCCATTGCTAAAACAGGCTCAGGGAAAACCTTGGGATATTTAATTCCAGCATTTATTCACCTCAAGCGCTCTGGTAATAACTCCAAAATGGGCCCCACTGCATTGGTACTTTCACCAACAAGGGAGTTGGCAACACAGATACAAGATGAAGCCATGAAGTTTGGGAAATCATCTAGAATTTCATGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAACTGAGAGACATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGTCGCTTGAATGATATTCTTGAGATGAGAAGAATTAGTCTTAATCAGGTTTCTTACCTGGTGCTAGATGAGGCAGACAGGATGCTGGATATGGGTTTTGAACCTCAAATTAGGAAAATTGTGAATGAGGTGCCCAATCGCAGGCAAACTCTAATGTTTACTGCAACATGGCCAAAGGAGGTTAGGAAAATTGCAGCTGATCTGCTAGTCAAGCCTGTCCAGGTGAACATTGGGAATGTAGATGAGCTTGTTGCTAACAAGTCTATTACTCAGCATGTTGAAGTATTGCCACCAATGGAGAAACAAAGACGGCTGGAACATATTTTGCGGTCACAGGATCAAGGATCAAAGATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTGACACGTCATTTCGGAGCTGCTGCTATTCATGGGGATAAATCCCAGGCTGAGAGGGATCATGTGTTGAGTCAGTTTCGAACTGGGAGGTCTCCTGTGCTAGTGGCCACAGATGTTGCTGCTCGGGGACTGGATATCAAGGACATTAGGGTGGTTGTCAATTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGAAGGACTGGAAGAGCTGGAGCCACTGGGCTAGCTTACACTTTCTTTGGTGACCAGGATGCTAAATATGCTTCAGATCTCATCAAAGTCTTGGAAGGTGCAAACCAGAAGGTACCTCCAGAACTTCGTGATATGTCATCACGGAGTGGTGGTGGGATGGGTAGATCCAGACGATGGGGTTCTGGGGGACGAGGTGGACATGGTGATTCTGGATATGGTGGAAGGAATAATGACTCTGGATATGGTGGAAGAGGTAATGATGCAGGATATGGTGGAAGAGGCAGTGATTCTAATTATGGAGGGAGGGGGACTGCTGCTTCTGGCAGAGGTGGAGGCCGTGGGTTTGACCATGACTCCCAGAGGAATGATAGGGGTCGGAGCCCAGACAAGGGATCTAGTTGGAGTGATCGCTTCAAAAGCGTCAACCGGGATCGCAGTCGTAGTCCTGACAGGGCTGCACTACCTCAACATTCCCAAGGTGGCAGCTTTCACAAGGCAATGATGGAACGTGGTGGTGGTGGTGGTGATCGCAATAAGAGCTTTAACCGGGACCGAAGCCGCAGTCCTAGCCCTCATAGACAGGAGAAGTGCCCAGCGGTTCGAGATCGTTCCCCAGTTTACAGTTTTCATCAATCAATGATGGGACGAGGTCAGTCATCCCCTTCATCTCAACGGCAGCGTGCACGCAGTCCTCACCGAAACTCACCCCCCTCCCAGGGTGATGGAAGATATGCTGGATCTCATTCATCTTACAATGGAGAAGTGGAGGAAGGGATGATTCCCGAGGAAGAAGGAATGATTGGTCAAGATGATCCCGTAAATGTCAATTAG

>Glyma19g00260.3   sequence type=CDS   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTCCGAGGTATGCACCACCAGACCCAACACTCCCTAAACCATGGCGGGGTCTTGTGGATGGCAAGACTGGGTATCTTTACTTTTGGAATCCTGAGACTAATGTCACCCAGTATGAGAGGCCATCCTCAAGCTCAGCTTCCCAGTCAAAGTTTTCTTCAGTGCCCAGCTCTTCTGTCCAGGTTCAACAATCATCTCAAGGGTCGCAACGTGGTCGTAGTCCTGATTTCAGTGATAGGTATGATCGAAATGGCACTGGTGGGTCAAACGACGCTGGATCCCGGAACAATCAGAGTTCCAAAGGGGGAAGTTATACTTCTCATGATGTTTCAAATGGAACAAATGTTGCTGGCAATGGTAATTCTTCTGTCAGAGGTCATGGGGCTTCAGATGCTGGAGCTGGACTATCTGCTGAGTCTTATCGACATCGGCATGAAATATCTGTGACTGGAGACAATGTGCCTCCACCGCTTGCATCATTTGGGTCAACTGGCTTTCCATCTGAGCTTCTGAGAGAGGTACAAAATGCTGGGTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCCATTGCTCTTCAAGGTAGAGATATAGTTGCCATTGCTAAAACAGGCTCAGGGAAAACCTTGGGATATTTAATTCCAGCATTTATTCACCTCAAGCGCTCTGGTAATAACTCCAAAATGGGCCCCACTGCATTGGTACTTTCACCAACAAGGGAGTTGGCAACACAGATACAAGATGAAGCCATGAAGTTTGGGAAATCATCTAGAATTTCATGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAACTGAGAGACATTGATCGTGGAGCAGATATTGTGGTAGCCACTCCTGGTCGCTTGAATGATATTCTTGAGATGAGAAGAATTAGTCTTAATCAGGTTTCTTACCTGGTGCTAGATGAGGCAGACAGGATGCTGGATATGGGTTTTGAACCTCAAATTAGGAAAATTGTGAATGAGGTGCCCAATCGCAGGCAAACTCTAATGTTTACTGCAACATGGCCAAAGGAGGTTAGGAAAATTGCAGCTGATCTGCTAGTCAAGCCTGTCCAGGTGAACATTGGGAATGTAGATGAGCTTGTTGCTAACAAGTCTATTACTCAGCATGTTGAAGTATTGCCACCAATGGAGAAACAAAGACGGCTGGAACATATTTTGCGGTCACAGGATCAAGGATCAAAGATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCTCGTAATCTGACACGTCATTTCGGAGCTGCTGCTATTCATGGGGATAAATCCCAGGCTGAGAGGGATCATGTGTTGAGTCAGTTTCGAACTGGGAGGTCTCCTGTGCTAGTGGCCACAGATGTTGCTGCTCGGGGACTGGATATCAAGGACATTAGGGTGGTTGTCAATTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGAAGGACTGGAAGAGCTGGAGCCACTGGGCTAGCTTACACTTTCTTTGGTGACCAGGATGCTAAATATGCTTCAGATCTCATCAAAGTCTTGGAAGGTGCAAACCAGAAGGTACCTCCAGAACTTCGTGATATGTCATCACGGAGTGGTGGTGGGATGGGTAGATCCAGACGATGGGGTTCTGGGGGACGAGGTGGACATGGTGATTCTGGATATGGTGGAAGGAATAATGACTCTGGATATGGTGGAAGAGGTAATGATGCAGGATATGGTGGAAGAGGCAGTGATTCTAATTATGGAGGGAGGGGGACTGCTGCTTCTGGCAGAGGTGGAGGCCGTGGGTTTGACCATGACTCCCAGAGGAATGATAGGGGTCGGAGCCCAGACAAGGGATCTAGTTGGAGTGATCGCTTCAAAAGCGTCAACCGGGATCGCAGTCGTAGTCCTGACAGGGCTGCACTACCTCAACATTCCCAAGGTGGCAGCTTTCACAAGGCAATGATGGAACGTGGTGGTGGTGGTGGTGATCGCAATAAGAGCTTTAACCGGGACCGAAGCCGCAGTCCTAGCCCTCATAGACAGGAGAAGTGCCCAGCGGTTCGAGATCGTTCCCCAGTTTACAGTTTTCATCAATCAATGATGGGACGAGGTCAGTCATCCCCTTCATCTCAACGGCAGCGTGCACGCAGTCCTCACCGAAACTCACCCCCCTCCCAGGGTGATGGAAGATATGCTGGATCTCATTCATCTTACAATGGAGAAGTGGAGGAAGGGATGATTCCCGAGGAAGAAGGAATGATTGGTCAAGATGATCCCGTAAATGTCAATTAG

Predicted protein sequences of Glyma19g00260

Limit To All Plant Sequences

>Glyma19g00260.1   sequence type=predicted peptide   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAATATVSLMGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSASQSKFSSVPSSSVQVQQSSQGSQRGRSPDFSDRYDRNGTGGSNDAGSRNNQSSKGGSYTSHDVSNGTNVAGNGNSSVRGHGASDAGAGLSAESYRHRHEISVTGDNVPPPLASFGSTGFPSELLREVQNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPAFIHLKRSGNNSKMGPTALVLSPTRELATQIQDEAMKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFCSTKKMCDQLARNLTRHFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPPELRDMSSRSGGGMGRSRRWGSGGRGGHGDSGYGGRNNDSGYGGRGNDAGYGGRGSDSNYGGRGTAASGRGGGRGFDHDSQRNDRGRSPDKGSSWSDRFKSVNRDRSRSPDRAALPQHSQGGSFHKAMMERGGGGGDRNKSFNRDRSRSPSPHRQEKCPAVRDRSPVYSFHQSMMGRGQSSPSSQRQRARSPHRNSPPSQGDGRYAGSHSSYNGEVEEGMIPEEEGMIGQDDPVNVN*

>Glyma19g00260.2   sequence type=predicted peptide   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSASQSKFSSVPSSSVQVQQSSQGSQRGRSPDFSDRYDRNGTGGSNDAGSRNNQSSKGGSYTSHDVSNGTNVAGNGNSSVRGHGASDAGAGLSAESYRHRHEISVTGDNVPPPLASFGSTGFPSELLREVQNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPAFIHLKRSGNNSKMGPTALVLSPTRELATQIQDEAMKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFCSTKKMCDQLARNLTRHFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPPELRDMSSRSGGGMGRSRRWGSGGRGGHGDSGYGGRNNDSGYGGRGNDAGYGGRGSDSNYGGRGTAASGRGGGRGFDHDSQRNDRGRSPDKGSSWSDRFKSVNRDRSRSPDRAALPQHSQGGSFHKAMMERGGGGGDRNKSFNRDRSRSPSPHRQEKCPAVRDRSPVYSFHQSMMGRGQSSPSSQRQRARSPHRNSPPSQGDGRYAGSHSSYNGEVEEGMIPEEEGMIGQDDPVNVN*

>Glyma19g00260.3   sequence type=predicted peptide   gene model=Glyma19g00260   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSASQSKFSSVPSSSVQVQQSSQGSQRGRSPDFSDRYDRNGTGGSNDAGSRNNQSSKGGSYTSHDVSNGTNVAGNGNSSVRGHGASDAGAGLSAESYRHRHEISVTGDNVPPPLASFGSTGFPSELLREVQNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPAFIHLKRSGNNSKMGPTALVLSPTRELATQIQDEAMKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFCSTKKMCDQLARNLTRHFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPPELRDMSSRSGGGMGRSRRWGSGGRGGHGDSGYGGRNNDSGYGGRGNDAGYGGRGSDSNYGGRGTAASGRGGGRGFDHDSQRNDRGRSPDKGSSWSDRFKSVNRDRSRSPDRAALPQHSQGGSFHKAMMERGGGGGDRNKSFNRDRSRSPSPHRQEKCPAVRDRSPVYSFHQSMMGRGQSSPSSQRQRARSPHRNSPPSQGDGRYAGSHSSYNGEVEEGMIPEEEGMIGQDDPVNVN*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain