Glyma18g52381 - SoyBase

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Report for Sequence Feature Glyma18g52381

Feature Type:	gene_model
Chromosome:	Gm18
Start:	61002939
stop:	61004309
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma18g52381

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_C6F190	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: NBS-LRR disease-resistance protein scn3r1 n=1 Tax=Glycine max RepID=C6F190_SOYBN	SoyBase	E_val: 8.00E-08	ISS
UniRef100_C6T3B3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T3B3_SOYBN	SoyBase	E_val: 8.00E-58	ISS

Expression Patterns of Glyma18g52381

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g52381 not represented in the dataset	Glyma18g52381 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g52381 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.18g286900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma18g52381

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma18g52381

Limit To All Plant Sequences

>Glyma18g52381.1   sequence type=CDS   gene model=Glyma18g52381   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGGCGGAAATCGTCGGCCAAATCAGAGAGGCTGCATACGAAGCCGAAGACATCATCGACACCTATGTGGCGGACATGATTCGACGTCGAAAGATGAACCTGTTGGAGAAGGTGGTCATCGAGGCCATGCTTGATTTCAACCTGAGTGATGCCATGCTTGATTTCAGATTAGGACTCAGCTGCAGAGGTTTAAAGGCCAAGGATTTTGATGCAACCCTTTTAACAATAAAGAACTTTGAAGTTCTTACTCTGTGTAAATGGACTTTTGAGGAATTTTCTTTTTTCACTAACTGA

Predicted protein sequences of Glyma18g52381

Limit To All Plant Sequences

>Glyma18g52381.1   sequence type=predicted peptide   gene model=Glyma18g52381   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVAEIVGQIREAAYEAEDIIDTYVADMIRRRKMNLLEKVVIEAMLDFNLSDAMLDFRLGLSCRGLKAKDFDATLLTIKNFEVLTLCKWTFEEFSFFTN*

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