Report for Sequence Feature Glyma18g49301
Feature Type: gene_model
Chromosome: Gm18
Start: 58667510
stop: 58670057
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g49301
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G39865 AT
Annotation by Michelle Graham. TAIR10: Glutaredoxin family protein | chr5:15965560-15966732 REVERSE LENGTH=390
SoyBase E_val: 7.00E-122 ISS
GO:0006499 GO-bp
Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation
SoyBase N/A ISS
GO:0045454 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell redox homeostasis
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0009055 GO-mf
Annotation by Michelle Graham. GO Molecular Function: electron carrier activity
SoyBase N/A ISS
GO:0015035 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein disulfide oxidoreductase activity
SoyBase N/A ISS
KOG2824
KOG
Glutaredoxin-related protein
JGI ISS
PTHR10168 Panther
GLUTAREDOXIN
JGI ISS
PTHR10168:SF44 Panther
GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTE
JGI ISS
PF00462 PFAM
Glutaredoxin
JGI ISS
UniRef100_Q2HVR5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Thioredoxin fold n=1 Tax=Medicago truncatula RepID=Q2HVR5_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233F0F1 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233F0F1 related cluster n=1 Tax=unknown RepID=UPI000233F0F1
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g49301
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma18g49301
Paralog Evidence Comments
Glyma09g37400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma18g49301 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g258500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g49301
Coding sequences of Glyma18g49301
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g49301.1 sequence type=CDS gene model=Glyma18g49301 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTTGTGCAAGTTCAAAGCAAAAGAAATGTCGGCGATGCAATGCTCCTTATTCTCCTGCTCCTAGAAGCTATTCAATGCACGTTCATCACCCACCTCTAGCAGAAGGTGATAGCTACCATGTTGTGGCACTCACTTCCACAACATTGGGCACTCTCAAACTCAATTCCCCTGCTCCAACTCAAAATTTTGCAAATTGTGACCATGATTTCAAGCTTTCCAATGGCAAGGTTGGAAACGCTGAAAGTTTCAGGTTTGATAGTGAGAGCTTTGTGCAAAGGCTTGAGGAGAAGGAGAAGGAGAAGAAGAGTGAGGTATTGGAGAAAGATAAGAAAGAAGAGTTCTCAATGGGGCTAATTGAGGCCAAGACTTGGTCTAACATGATTGAGCAAAAGTTGCCAAAAGTTTTTCCCAAGACCCCAATTAGAACACCACCTGGTGAGCCTGAGACAATCAACACATGGGAACTCATGGAAGGCCTTGAAGACACCACCACGCCTTTCCGGTCGCCGAGCCACTTCCGGAGTTTCTCTTTTGATTTCAATGGTGGTGATGATGTTGGTGTTGGTGATGGTGGTGTTGATGTTGATGTTGATGTTGATCCACCCAAGATGAGTGTTGTTGCTTCTCCAAAACCCATGTGGCTTCTCATGACCGAGGAGGAGTCAAGACTCAACCCTGAAATCTCAGATTTTGATCCTGAAGTGATTTCCTCATTCAGAAAGTCCTTGCAACAGCTCTCTCCGGATAGCCCCTTCCACCTTCAACCGGCGCCGCCGGGCGATGAAGAAGACAAGCATGGGACTAAAAAGGGGTCCCCATTTGAGGAAAATGAATTTGTTGTGGATGATGTCAAGGTTGATGATCCATGTGGGAAGGACAAGGTGGTGTTGTATTTCACTAGCTTACGCGGCGTGCGAAAGACTTACGAGGCTTGCTGCCAAGTGAGGATGATTCTGAAGGGATTGGGAGTAAGAGTGGATGAGAGGGATGTGTCAATGCATTCAGGGTTCAAGGAAGAGCTTAAAGAGCTATTGGGTGATGGCTATGGTAGTTTAGGATTGCCAAGAGTGTTTCTTGGGGGGAATTACATTGGTGGAGCTGAGGAAATTCAGAGGCTGCATGAGGATGGGAAGCTTGAGAAGCTTTTGGTTTGTTGTGAGAAGATTGAGGACAGTGTTGGAGGTGATGGAGGAGGGGGAGTGTGTGAGGCTTGTGGGGATATAAGGTTTGTTCCTTGTGAAACATGTTGTGGAAGCTGTAAAATTTACTATACAGGTGATGAAGAAGATGAAGAAGAATATGTTGATGGTGAAGTGGGGGAGTGTGGATTCCAGCGTTGCCCTGATTGCAATGAAAATGGACTAATTCGTTGCCCCATGTGTTGCTGTTAG
Predicted protein sequences of Glyma18g49301
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g49301.1 sequence type=predicted peptide gene model=Glyma18g49301 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGCASSKQKKCRRCNAPYSPAPRSYSMHVHHPPLAEGDSYHVVALTSTTLGTLKLNSPAPTQNFANCDHDFKLSNGKVGNAESFRFDSESFVQRLEEKEKEKKSEVLEKDKKEEFSMGLIEAKTWSNMIEQKLPKVFPKTPIRTPPGEPETINTWELMEGLEDTTTPFRSPSHFRSFSFDFNGGDDVGVGDGGVDVDVDVDPPKMSVVASPKPMWLLMTEEESRLNPEISDFDPEVISSFRKSLQQLSPDSPFHLQPAPPGDEEDKHGTKKGSPFEENEFVVDDVKVDDPCGKDKVVLYFTSLRGVRKTYEACCQVRMILKGLGVRVDERDVSMHSGFKEELKELLGDGYGSLGLPRVFLGGNYIGGAEEIQRLHEDGKLEKLLVCCEKIEDSVGGDGGGGVCEACGDIRFVPCETCCGSCKIYYTGDEEDEEEYVDGEVGECGFQRCPDCNENGLIRCPMCCC*