Report for Sequence Feature Glyma18g48520
Feature Type: gene_model
Chromosome: Gm18
Start: 57930426
stop: 57936196
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g48520
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G04160 AT
Annotation by Michelle Graham. TAIR10: Subtilisin-like serine endopeptidase family protein | chr2:1401450-1407694 REVERSE LENGTH=772
SoyBase E_val: 1.00E-45 ISS
GO:0006508 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteolysis
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0009733 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to auxin stimulus
SoyBase N/A ISS
GO:0010102 GO-bp
Annotation by Michelle Graham. GO Biological Process: lateral root morphogenesis
SoyBase N/A ISS
GO:0019761 GO-bp
Annotation by Michelle Graham. GO Biological Process: glucosinolate biosynthetic process
SoyBase N/A ISS
GO:0043086 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of catalytic activity
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0005618 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cell wall
SoyBase N/A ISS
GO:0004252 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity
SoyBase N/A ISS
GO:0042802 GO-mf
Annotation by Michelle Graham. GO Molecular Function: identical protein binding
SoyBase N/A ISS
PTHR10795 Panther
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE
JGI ISS
PTHR10795:SF17 Panther
gb def: possible protease [sinorhizobium meliloti]
JGI ISS
PF00082 PFAM
Subtilase family
JGI ISS
PF10536 PFAM
Plant mobile domain
JGI ISS
UniRef100_G7KTF0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Subtilisin-like protease n=1 Tax=Medicago truncatula RepID=G7KTF0_MEDTR
SoyBase E_val: 3.00E-76 ISS
UniRef100_I1N457 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1N457_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g48520
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma18g48520 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma18g48520
Coding sequences of Glyma18g48520
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g48520.1 sequence type=CDS gene model=Glyma18g48520 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTTAGAACAAGAGGATTAGGTCGTGCCTTAGTTACTAGGGTCACAGGCAGAGGTAGACACGATGAGCATCATGCAGATGATGTTCGCCGGCGACGTAGGCCGACCGCATCTACCCGTAGGCAACAGGATGTAGCTCCGATTACTGCAGATGTACCTGCAGCTTCTGTAGAGGGCTTAGCTGATGCTATTGCTGATGATGTTGCTGAGGGATTTCCTGGTGGGCCACATGACCCATCAGTGCTGACCTCGTTTGGTGACCACGTTGCACATCGCATATGGATGGGAGAGGAACATCCTGACTTGAGGTTGGCCTCCCACGGCAGGAAGGTTGAGAAAATTGGGAGGCCATCACCTGAGATTGAAGGGCTAGTCGCTGCCATAGGATTAAGCCCTTTGATCGGTTGCTCAATAGTCACCGGCAATCCGGGACTTATATCTGCGCTTGTGAAGAGGTGGCACGGGGAGACCAGCAGCTTCCACCTTCCAATGGGAGAGTTGACGATCACACTCGATGATGTGTCATTACTCCTCCATCTGCCGATCACAGACACCTTGCATAACTTCGAGCCTCTAGTTGTGGAGGAGGCGGTCGTCTTGCTGATGGAGTTGCTCGAGGTCTTGACAATGCGTGCTTATCTCCTCCACTTGGTTGGTTGCACTCTTATCGCTAACAAGAGTGCAACACATGTTGATGTAGTGCATCTAGAGGCTTTTCGAGACCTGGGTGAGAGTGGGAGGTTTTCTTGGGGAGTTGCGGCGCTGGTGCATATGCATGACCAGTTAAATGAAGTTTCTCAGACCACTACACGACAGATTGTTGGGTACATTACTTTATTACAGTGTTGGATATATGAGCATTTTTCTAGTGTTCATGACAGCGTCATTGACGATGCATACGATGAGACATCCCCACGTATAAGGTCGCACGACAGTTCGGGTACGTTCAGACCATTCCTCCACCACCTGTATCAGCAGATTACATGCAGTGGATTGCAACTTACAAAGTGTGTTGGTCTCTTACCGATCCTGCAAGTTGCAAGTTGTTATGGGGCTGATGTGTTAGCTGCTATTGACCAAGCCATAGATGATGGTGTTGATGTCATCAATGTTTCTTTTGGTGTCAGCTACGTTGTCACTGCTGAAGGAATATTCACAGATGAAATTTCCATTGGGGCATTCCATGCAATTTCTAAAAACATACTTTTAGTTGCCTCTGCAGGAAATGATGGACCAACGCCTGGAACTGTTGCCAATGTGGCTCCTTGCGTCTTCACAATTGCTGCTAGCACATTAGACAGAGATTTCAGCAGCAATTTAACCATTAATAATCAGCTAATTGAGGATGCGTTTGATAAAACACTAGCAGATGCTTTTGCTTACGGTTCAGGACATGTTCGACCCGATCTAGCGATAGATCCTGGGCTTGTTTACGATCTAAGCCTCACTGATTACTTGAACTTCTTATGTGCTTCCGGATACGACCAACAACTCATTTCCGCCCTCAATTTCAACAGGACATTCATTTGTTCAGGTTCTCACAGCGTAAATGACTTGAACTACCCTTCAATCACATTGCCAAATCTTCGCTTAAAGCCCGTGGCCATTGCTCGCACAGTCACAAATGTTGGGCCACCAAGCACATACACTGTAAGTACCCGCTCGCCAAATGGATATAGCATTGCCGTTGTGCCACCTTCCTTGACTTTCACGAAAATTGGTGAAAGGAAGACATTCAAAGTCATTGTGCAAGCAAGCAGTGCAGCTACGCGGAGAAAGTATGAATTCGGGGATTTTCGTTGGACAGACGGAAAGCATATAGTAAGGAGTTCTATTACAGTTAAGCGCAGATGA
Predicted protein sequences of Glyma18g48520
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g48520.1 sequence type=predicted peptide gene model=Glyma18g48520 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVRTRGLGRALVTRVTGRGRHDEHHADDVRRRRRPTASTRRQQDVAPITADVPAASVEGLADAIADDVAEGFPGGPHDPSVLTSFGDHVAHRIWMGEEHPDLRLASHGRKVEKIGRPSPEIEGLVAAIGLSPLIGCSIVTGNPGLISALVKRWHGETSSFHLPMGELTITLDDVSLLLHLPITDTLHNFEPLVVEEAVVLLMELLEVLTMRAYLLHLVGCTLIANKSATHVDVVHLEAFRDLGESGRFSWGVAALVHMHDQLNEVSQTTTRQIVGYITLLQCWIYEHFSSVHDSVIDDAYDETSPRIRSHDSSGTFRPFLHHLYQQITCSGLQLTKCVGLLPILQVASCYGADVLAAIDQAIDDGVDVINVSFGVSYVVTAEGIFTDEISIGAFHAISKNILLVASAGNDGPTPGTVANVAPCVFTIAASTLDRDFSSNLTINNQLIEDAFDKTLADAFAYGSGHVRPDLAIDPGLVYDLSLTDYLNFLCASGYDQQLISALNFNRTFICSGSHSVNDLNYPSITLPNLRLKPVAIARTVTNVGPPSTYTVSTRSPNGYSIAVVPPSLTFTKIGERKTFKVIVQASSAATRRKYEFGDFRWTDGKHIVRSSITVKRR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
