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Report for Sequence Feature Glyma18g48070

Feature Type:gene_model
Chromosome:Gm18
Start:57581457
stop:57584078
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma18g48070
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
UniRef100_C6TN26UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6TN26_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma18g48070
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g48070 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.18g245500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma18g48070
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma18g48070
>Glyma18g48070.2   sequence type=CDS   gene model=Glyma18g48070   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATTGCACAATTCTTTGATAAATCATACATAGTAATCCAACGGTCCTGGTTCCTTCTACAGAGAAAACTTTGCCTAGAAGACCCAAGCTCGTGTCTAAGCGCTACGGTTTATGTGATGTCTTCGTCTATTCCCAATTCCAAATTCAAGAAATTTTTTAAACTTGACATATCTGCTATCACCTTTTCCGTTTCTTGCGATTCGACGATGGCCGATCAAAAGCTTTCAGAACCGGCGCTTAAACGTGAGCAGCTTGATGAATTCGTGAGTAGTCTATATTTTGAACAACGAATTCTTGAACTCCGACTTCTTCAAGACCTCGAGAACAATGATGAATGTAGGAAAAATGGGAGCCTGAAAAGGTTAAATGACCAGAGTGATGTCTGTGGATTTAGAAGTTGCTTCAAAAATCATTATGATTCGCTTCCGAATCAGAGGTGCTTGAGGAATCGAGAAGAAGTGATTCAGGAGACGATGGAAATGGAGTTGGAAAATATGATGGAACTGGGCACCCTCAAGGGCAAGAAAACATATTCTTTTAAGAATGGTACAAGAAGTGCGTTGAACCTTGAGAACACCACAAGATCCTTTCTAGATAACAATAAATCAAATGATAATAACTGGAATGGCGAAATGACTTTACCCCTGCTAGTAGACAAGTCCACCGTCTGTATGTTAAACAAGGATGAGGAAGTAGACGAGCCCCTCAGTCCGGGCAAACACATGAAAACTGCACAAAGTGTTTTATCACTTTTGATAGCGACTATTGCGCTTCTTTGGATTCTCACCGACCTATGCAGCCTGTTATCAATTATCAAGCTTCAGCCAGAACATGGCCCCCTCCCCATTCGGTTTTCTTTGCTTGAACCTGTTGGTTTCATGGTGTTTGTTTGGGCTGTTGCAGCAATGATTGTTATTGGTGCACCATTTTCTCGTTTGGTGAGTGCCATTCTTTTATTTTGGGGTATTTGGCTGCTTGTCAGATCTTCTCAATCACTCACTACACTATGCCTTCCAATATTGGGAATCCTTCTGATGGTGTGGCATCTCTGCTCAAGGAAAAGCAGCTGCCAAATAAAGGGTAATGAACAAGGAAGTGAAGCTCCCAAAATTAAACCAATGCGTTTCACTCTTGCTGTCTAA
Predicted protein sequences of Glyma18g48070
>Glyma18g48070.2   sequence type=predicted peptide   gene model=Glyma18g48070   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MIAQFFDKSYIVIQRSWFLLQRKLCLEDPSSCLSATVYVMSSSIPNSKFKKFFKLDISAITFSVSCDSTMADQKLSEPALKREQLDEFVSSLYFEQRILELRLLQDLENNDECRKNGSLKRLNDQSDVCGFRSCFKNHYDSLPNQRCLRNREEVIQETMEMELENMMELGTLKGKKTYSFKNGTRSALNLENTTRSFLDNNKSNDNNWNGEMTLPLLVDKSTVCMLNKDEEVDEPLSPGKHMKTAQSVLSLLIATIALLWILTDLCSLLSIIKLQPEHGPLPIRFSLLEPVGFMVFVWAVAAMIVIGAPFSRLVSAILLFWGIWLLVRSSQSLTTLCLPILGILLMVWHLCSRKSSCQIKGNEQGSEAPKIKPMRFTLAV*






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