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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G27220 | AT | Annotation by Michelle Graham. TAIR10: NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919 | SoyBase | E_val: 5.00E-62 | ISS |
GO:0006952 | GO-bp | Annotation by Michelle Graham. GO Biological Process: defense response | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0043531 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ADP binding | SoyBase | N/A | ISS |
KOG4658 | KOG | Apoptotic ATPase | JGI | ISS | |
PTHR23155 | Panther | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | JGI | ISS | |
PTHR23155:SF121 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF00931 | PFAM | NB-ARC domain | JGI | ISS | |
UniRef100_C0JJH4 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Rpp4 candidate 1 n=1 Tax=Glycine max RepID=C0JJH4_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_C0JJH4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Rpp4 candidate 1 n=1 Tax=Glycine max RepID=C0JJH4_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma18g46101 not represented in the dataset |
Glyma18g46101 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
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Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma18g46101.1 sequence type=CDS gene model=Glyma18g46101 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGACCCAATTACTTCTGCCACTGCCCAAAGTGCACTGCAAATTGCAGAACATGTGGTCAAACGACAAGTGGGTTACATATTTAATTACAAAGACAAATTTAAAGAGGTGGAACAATACATTGAGAGGCTGGATGATACTAGGAAGAGGGTTCAAAATGAAGTTAATGATGCAGAGAAGAACGGAGAAGAAATTAACGATGAAGTTCAACATTGGTTAAAACAGGTGGATGAGAAGATAAAAAAATATGAGTGTTTTATTGATGATGAACGCCATGCACAGACAAGGTGTTCCATTAGATTGATCTTTCCAAATAACTTGTCATTGAGGTATCGGTTAGGCAGAAAAGCTACAAAGATAGTAGAGGAAATCAAAGCAGATGGACATTCAAATAAAAAGTTTGATAAAGTTTCATATCGGTTGGGCCCATCCTCTGATGCTGCTTTGTTAAACACTGGTTATGTGAGCTTTGGGTCGAGAAATGAAACTATGGAGAAGATTATGAAAGCACTGGAAGACTCGACAGTTAATATTGTTGGAGTCTATGGGGCTGGTGGTGTGGGTAAGACTACTTTAGTCAAAGAAGTTGCTAACAAAGCTCGAGAAAAGAAGTTGTTCAATATGGTGGTCATGGCAAATGTAACAAGAATTCCTGACATAGAAAAAATTCAAGGACAAATTGCTGAGATGTTGGGAATGAGATTGGAAGAGGAAAGTGAAATTGTAAGAGCAGATCGCATTCGAAAGAGGTTAATGAATGAAAAGGAGAATACCCTTATAATCCTAGATGATCTCTGGGATGGATTGAACTTGAATATATTGGGGATTCCACAAAAGTTATCTGGTGATCACAAGGGATGCAAAATTCTTCTAACATCCAGAAGTAAAGAAGTAATATGTAATAAAATGGATGTGCAGGAGAGATCAACTTTCTCGGTAGGAGTCCTTGATGAAAACGAGGCAAAGAGTTTCCTTAAGAAATTGGCGGGAATACGTGCCCAAAGTTTTGAATTTGATGAGAAAGTCATTGAAATTGCCAAAATGTGCGATGGATTGCCTATGGCATTAGTTTCCATAGGAAGGGCTCTAAAGAATAAAAGCTCCTTTGTATGGCAGGATGTCTGTCAACGAATTAAACGACAAAGTTTTACAGAAGGGCACGAATCTATCGAGTTCTCTGTAAATTTGAGCTTTGAGCATCTAAAAAATGAGCAGCTGAAACATATTTTCTTACTGTGTGCTAGAATGGGAAATGATGCTTTGATTATGGACTTGGTGAAGTTCTGTATCGGGTTGGGTTTGCTTCAAGGGGTCCACACAATTAGAGAAGCGAGAAACAAAGTAAATATGCTGATAGAGGAGCTAAAAGAATCAACTTTGTTGGTGGAAAGTCTCTCTCATGACCGCTTCAACATGCATGACATTGTGCGGGATGTTGCTCTTTCAATATCATCCAAAGAAAAACATGTTTTTTTTATGAAAAATGGCATAGTAGACGAGTGGCCTCACAAAGATGAACTTGAAAGGTACACTGCTATATGTTTACACTTTTGTGATATCAATGATGGGCTTCCCGAGAGTATACACTGTCCTAGACTTGAAGTCTTACATATTGACAGTAAAGATGATTTTTTGAAAATACCAGACGACTTTTTTAAAGATATGATTGAACTCAGAGTCTTGATATTGACTGGTGTTAATCTTTCATGCTTACCTTCTTCTATTAAATGCCTAAAAAAACTGAGAATGCTTAGTTTGGAGAGATGCACTCTAGGAGAGAACTTATCAATCATTGGAGAGTTAAAGAAATTACGAATTCTTACTCTTTCAGGATCTAACATTGAAAGTTTGCCTCTAGAATTTGGGCAATTGGATAAGCTGCAACTTTTTGACATAAGCAATTGCTCAAAACTAAGAGTAATACCTTCCAATACCATATCAAGGATGAACAGTTTGGAAGAGTTTTACATGAGAGACAGCTTGATTCTGTGGGAGGCTGAGGAGAATATCCAAAGTCAAAAAGCTATTCTTTCTGAGTTGAGGCACTTGAATCAGTTGCAAAATCTAGACGTACACATTCAGAGTGTTTCCCATTTTCCGCAGAACTTGTTTTTGGACATGTTGGATAGTTACAAGATTGTCATTGGTGAATTCAACATGCTTAAAGAGGGAGAATTCAAAATCCCTGACATGTATGACCAAGCGAAATTTTTGGCATTGAACCTAAAAGAAGGTATTGACATTCATTCTGAAACATGGGTTAAAATGTTGTTCAAGAGTGTTGAATATTTGCTGCTGGGAGAACTCAATGATGTTCATGATGTTTTTTATGAATTAAATGTTGAAGGATTTCCATATTTGAAACATTTATCCATTGTGAACAATTTTGGTATTCAATATATTATTAACTCAGTGGAGCGGTTTCACCCTTTACTGGCTTTTCCCAAATTGGAGTCCATGTGTCTTTACAAACTGGATAATTTGGAGAAAATATGTGGCAATAATCATCTTGAAGAGGCTTCCTTTTGCAGATTAAAAGTCATCAAGATTAAAACATGTGATAAATTGGAAAACATTTTCCCATTTTTCATGATTGAGTTCCCTCAATTACGACTTTTAACATTGAAATCTTTACCAGCATTTGCTTGTTTATATACCAACGACAAGATGCCTTGTAGTGCACAATCATTGGAAGTCCAAGTGCAAAACAGAAACAAAGATATCATCACTGAAGTTGAGCAAGGTGCCACTAGTTCTTGTATATCACTCTTCAATGAAAAG
>Glyma18g46101.1 sequence type=predicted peptide gene model=Glyma18g46101 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDPITSATAQSALQIAEHVVKRQVGYIFNYKDKFKEVEQYIERLDDTRKRVQNEVNDAEKNGEEINDEVQHWLKQVDEKIKKYECFIDDERHAQTRCSIRLIFPNNLSLRYRLGRKATKIVEEIKADGHSNKKFDKVSYRLGPSSDAALLNTGYVSFGSRNETMEKIMKALEDSTVNIVGVYGAGGVGKTTLVKEVANKAREKKLFNMVVMANVTRIPDIEKIQGQIAEMLGMRLEEESEIVRADRIRKRLMNEKENTLIILDDLWDGLNLNILGIPQKLSGDHKGCKILLTSRSKEVICNKMDVQERSTFSVGVLDENEAKSFLKKLAGIRAQSFEFDEKVIEIAKMCDGLPMALVSIGRALKNKSSFVWQDVCQRIKRQSFTEGHESIEFSVNLSFEHLKNEQLKHIFLLCARMGNDALIMDLVKFCIGLGLLQGVHTIREARNKVNMLIEELKESTLLVESLSHDRFNMHDIVRDVALSISSKEKHVFFMKNGIVDEWPHKDELERYTAICLHFCDINDGLPESIHCPRLEVLHIDSKDDFLKIPDDFFKDMIELRVLILTGVNLSCLPSSIKCLKKLRMLSLERCTLGENLSIIGELKKLRILTLSGSNIESLPLEFGQLDKLQLFDISNCSKLRVIPSNTISRMNSLEEFYMRDSLILWEAEENIQSQKAILSELRHLNQLQNLDVHIQSVSHFPQNLFLDMLDSYKIVIGEFNMLKEGEFKIPDMYDQAKFLALNLKEGIDIHSETWVKMLFKSVEYLLLGELNDVHDVFYELNVEGFPYLKHLSIVNNFGIQYIINSVERFHPLLAFPKLESMCLYKLDNLEKICGNNHLEEASFCRLKVIKIKTCDKLENIFPFFMIEFPQLRLLTLKSLPAFACLYTNDKMPCSAQSLEVQVQNRNKDIITEVEQGATSSCISLFNEK
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||