Report for Sequence Feature Glyma18g44500
Feature Type: gene_model
Chromosome: Gm18
Start: 54199148
stop: 54205257
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g44500
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G57170 AT
Annotation by Michelle Graham. TAIR10: N-acetylglucosaminyl transferase component family protein / Gpi1 family protein | chr3:21159620-21162259 REVERSE LENGTH=560
SoyBase E_val: 2.00E-167 ISS
GO:0006506 GO-bp
Annotation by Michelle Graham. GO Biological Process: GPI anchor biosynthetic process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0016740 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity
SoyBase N/A ISS
GO:0017176 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol N-acetylglucosaminyltransferase activity
SoyBase N/A ISS
KOG1183
KOG
N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis
JGI ISS
PTHR21329 Panther
N-ACETYLGLUCOSAMINYL TRANSFERASE COMPONENT GPI1-RELATED
JGI ISS
PTHR21329:SF3 Panther
PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERA
JGI ISS
PF05024 PFAM
N-acetylglucosaminyl transferase component (Gpi1)
JGI ISS
UniRef100_I1N375 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N375_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q2HRH2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: N-acetylglucosaminyl transferase component n=1 Tax=Medicago truncatula RepID=Q2HRH2_MEDTR
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g44500
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma18g44500 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g212600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g44500
Coding sequences of Glyma18g44500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g44500.1 sequence type=CDS gene model=Glyma18g44500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGAAGACATTGTAGGCTTTGGTGGCCAATGCAACTTTTATCAAATGAAGAATCGTCATCCAGTATTTTGTTGGGGTGGTTTGTCACCTGCTCACCATCATCCCTTGACATTATTGTAGCCTTTACTTGCAGTGAAGTTTTGCTTTCTAGTTATAGTCCTGGCATTGAGGGAATCATTCATGGCACATGTGGGAGCATGCCTTCAGTTCTTGAGGATAAGTCCAAGTTCTCTGTGCTTGGTCTGTGTGTCACTGACCCTACTACTAGTAATGGCTTGATGAATGGGGCGGAAGATGACAAAAAGAAGTTCTCTGAGTTTGGCAATGCTTTGCAAGAGGGAGATACGGATAGAAAGAATAACTCTAGGAGTTGTTGTTGCTTCCAGTTAGATGGTTCATTGAGGAAAAGTAGCCAATATGTTCTTGGAAGAAGTAATTGGGTTCTGCTCATGTTTGATTCTCCTGAACAGACTGATGTAGGAATACACAGGCTTCCAAAATTGCATCACATTCATTGGAATGGACTAACTGTGTCACAATATGATGTTCACGTTATAATTTATGAAACACCCTCTTATGGTGCCCATCATTTCTCATTATGTCATCCGGGTTCAAATGAGAAAGCTAAAACTTCCATTAAAAATCCTAAATGGGTCGATGAGCTTCATAAAAAGCAACAATTCATTGAATTGGATACAATTACTCTGGCAATTAATTGCACAGCTGCTGCTAAAAGAATTTTTGAGACACACCTGGTCCCAAGAAGATCATTGAGCCAGCTCTCCATATTTCCCATGCTTTATGTTGTCACAGGGCACCTGTTTTCCAAATTTTGGGCATCGATCTCCACCATGCTCTATATTGTTCTTCAGTTTTTCCAAACACATTTTAATTACGAATCAGAATCATGGGTCTATGGGACATCAACAAATGTATTCATTAAGACTGCTTGGATAAATATGCGAATCCGTTGTTGTCAGATATTATATTGGCCAATCTTTCTTTGGGAGAATGACCTCAGGTCACAATCATGTGTTGAATATGTAGAGAAAGCTGCAATGCATAGGCATTCTATGTGGTCTACTTTGGTTGTTGATGTTCTCCTGGGAAACTTGGTTGGTTGGGCATTATTATATCACGCAGAATCAGTTTGCCTTTCAGTTTTGAACTTTATGCATGGGTTTTCCTCATTTTTGCGCTCTGGGTGTGTGTGGTTAATGGGAAACCCTGCAGGCTTCAAATTGAATGCTGAGTTGGCTGGAGTACTTGGCATGGCTTCTTTGAATGCAGTCCAGATATGGTCAACACTCTGGATCTTTGTGGGTTACATCTTCAATTATATTATTCAAGGGCTTTCTGTCTTAGGAATCCTTTGTGGATTCACTGTTCCTGCTGCTTTGGTCATAGACATGATTGCACTGGCAACTTTACACATTTCAACTCTTCATTGGTTTATTTCACTTGTATATTCATCACAGATACAGGCATTAGCTGCCTTGTGGCGGCTTTTCAGGGGTCGGAAATGGAATCCTCTGAGGCAGCGGTTAGATAGCTTTGACTATACTGTGAAGCAACACATTGTTGGATCACTTTTATTTACACCACTTCTACTTCTTTTACCAACTACTTCTGTTTTCTATATATTCTTTAGTATCATGGACACAACCATTAACCTTGTCTGTCTACTGATTGAAGTCACTATTTCGGTAATTCATGTTACCCCTTATACCAAGATATTTCTTTGGTTGGTAAGACCAAGAAGATTCCCTTCTGGAATATGGCTTGAAATTATTGGTTGTCAGAGTAATAGTACTGCTTCTCCAAGTGCTGATATTACTGATGAAATGACCTCATACAAGGAGTCATTGCATCTAAAGGATTTCAATAGAGAAAAATCTAGTAATCTAGTTTCTGCTCTCCACAGCAACTACTTGAGCTTAGGAAAAATTATCTCACCTCACTACAAACATGTTTTTTTGGGAGTTTCTGGGTCAACCATCTCCACAGTGGCTCATGGAATACTCATTGGACAAAGAATGCCATCTATGCGTGGCACCCTTCTACCTTCACCAATGCCATGGACGTCTATGCACTACAAAGAGTATTGGCGTGTTTGTCATGATTCACTTATTGCATGCTTCAGATGA
Predicted protein sequences of Glyma18g44500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g44500.1 sequence type=predicted peptide gene model=Glyma18g44500 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRRHCRLWWPMQLLSNEESSSSILLGWFVTCSPSSLDIIVAFTCSEVLLSSYSPGIEGIIHGTCGSMPSVLEDKSKFSVLGLCVTDPTTSNGLMNGAEDDKKKFSEFGNALQEGDTDRKNNSRSCCCFQLDGSLRKSSQYVLGRSNWVLLMFDSPEQTDVGIHRLPKLHHIHWNGLTVSQYDVHVIIYETPSYGAHHFSLCHPGSNEKAKTSIKNPKWVDELHKKQQFIELDTITLAINCTAAAKRIFETHLVPRRSLSQLSIFPMLYVVTGHLFSKFWASISTMLYIVLQFFQTHFNYESESWVYGTSTNVFIKTAWINMRIRCCQILYWPIFLWENDLRSQSCVEYVEKAAMHRHSMWSTLVVDVLLGNLVGWALLYHAESVCLSVLNFMHGFSSFLRSGCVWLMGNPAGFKLNAELAGVLGMASLNAVQIWSTLWIFVGYIFNYIIQGLSVLGILCGFTVPAALVIDMIALATLHISTLHWFISLVYSSQIQALAALWRLFRGRKWNPLRQRLDSFDYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFSIMDTTINLVCLLIEVTISVIHVTPYTKIFLWLVRPRRFPSGIWLEIIGCQSNSTASPSADITDEMTSYKESLHLKDFNREKSSNLVSALHSNYLSLGKIISPHYKHVFLGVSGSTISTVAHGILIGQRMPSMRGTLLPSPMPWTSMHYKEYWRVCHDSLIACFR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
