Glyma18g44430 - SoyBase

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Report for Sequence Feature Glyma18g44430

Feature Type:	gene_model
Chromosome:	Gm18
Start:	54119267
stop:	54119638
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma18g44430

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_B9RNV5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNV5_RICCO	SoyBase	E_val: 1.00E-23	ISS
UniRef100_UPI00023397D0	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI00023397D0 related cluster n=1 Tax=unknown RepID=UPI00023397D0	SoyBase	E_val: 2.00E-59	ISS

Expression Patterns of Glyma18g44430

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g44430 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.18g212000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma18g44430

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma18g44430

Limit To All Plant Sequences

>Glyma18g44430.1   sequence type=CDS   gene model=Glyma18g44430   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGTCCAAAAATTGACAGCAGGTGCTTTTGTGCATGCAGCAGAGCATGAACGCCTTCCTCTTCGAGTTATAGTCAGGTCTTCTATCAGCTTTCGAACACCCGGTAACAATAGTGCATGCGACCCTTTATGCTCTCCAATGAACCGAGATGAGGGATATGAGACAACAATGGGAGATAGCTGCCAAGCCACCCTCAAGAATCAGATGAGTCATTTGAGGATCAAGGATGAAGAGTTACATAAAAATGGGAAGTTGAGCAAGAAGAATAGCAAAAACAACAAAACTGACATTCAATTGCTGCCATTGCAGTCAAGGAGAATCTTTGACAAGTTATGGAGCGTGTGA

Predicted protein sequences of Glyma18g44430

Limit To All Plant Sequences

>Glyma18g44430.1   sequence type=predicted peptide   gene model=Glyma18g44430   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDVQKLTAGAFVHAAEHERLPLRVIVRSSISFRTPGNNSACDPLCSPMNRDEGYETTMGDSCQATLKNQMSHLRIKDEELHKNGKLSKKNSKNNKTDIQLLPLQSRRIFDKLWSV*

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