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Report for Sequence Feature Glyma18g36315

Feature Type:gene_model
Chromosome:Gm18
Start:42645074
stop:42646305
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma18g36315
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G24870AT Annotation by Michelle Graham. TAIR10: Helicase/SANT-associated, DNA binding protein | chr3:9075237-9084278 REVERSE LENGTH=1907 SoyBaseE_val: 9.00E-31ISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0048046GO-cc Annotation by Michelle Graham. GO Cellular Compartment: apoplast SoyBaseN/AISS
GO:0003677GO-mf Annotation by Michelle Graham. GO Molecular Function: DNA binding SoyBaseN/AISS
UniRef100_F4J7T2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Helicase/SANT-associated, DNA binding protein n=1 Tax=Arabidopsis thaliana RepID=F4J7T2_ARATH SoyBaseE_val: 4.00E-28ISS
UniRef100_UPI0002337C61UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002337C61 related cluster n=1 Tax=unknown RepID=UPI0002337C61 SoyBaseE_val: 4.00E-38ISS

Expression Patterns of Glyma18g36315
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g36315 not represented in the dataset
Glyma18g36315 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g36315 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma18g36315
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma18g36315
>Glyma18g36315.1   sequence type=CDS   gene model=Glyma18g36315   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTAACATGTCCAGTCCAAGTAAATTTATTAGAATCATTAGTGGTGGACGAGATAGGGGGAGGAAAGCCAAAGCACTTAAGGTTTCTGTGGGACAGCCTGGTTCTGGAAGTCCTTGGTCACTATTTGAAGAGCAGGCTCTTGTTGTCCTGGTGCATGATATGGGTCCAAACTGGGAGCTTGTTAGTGATGCTATCAACAGTACTAGAGAAGGGTTTAGGTCGTATGACTTGACCCGTATGACATGA
Predicted protein sequences of Glyma18g36315
>Glyma18g36315.1   sequence type=predicted peptide   gene model=Glyma18g36315   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSNMSSPSKFIRIISGGRDRGRKAKALKVSVGQPGSGSPWSLFEEQALVVLVHDMGPNWELVSDAINSTREGFRSYDLTRMT*






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