SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT3G24870 | AT | Annotation by Michelle Graham. TAIR10: Helicase/SANT-associated, DNA binding protein | chr3:9075237-9084278 REVERSE LENGTH=1907 | SoyBase | E_val: 1.00E-41 | ISS |
| GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
| GO:0048046 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: apoplast | SoyBase | N/A | ISS |
| GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
| UniRef100_B9S516 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO | SoyBase | E_val: 7.00E-52 | ISS |
| UniRef100_UPI0002337C61 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002337C61 related cluster n=1 Tax=unknown RepID=UPI0002337C61 | SoyBase | E_val: 5.00E-98 | ISS |
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Glyma18g36290 not represented in the dataset |
Glyma18g36290 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
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| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma18g36290.1 sequence type=CDS gene model=Glyma18g36290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high AACAGCATAACTTTTTTATATCCTGTTGGCACTTTTCCTGCTGATTTTGTATGGAATGATAACCAACCATTAGTACCTGTCCATAATTCACACGGGATTGCTCTTTCCCAAATCTGCCCGAACAACTTGAATGGAAATGGTTACCTTGAATTTTTCACATTCTGGTTGTACATTATTGTTTTGTTTGGCACAATCACAAGTATCTTAACCATTTTTGAGTTCTGCCCAGATGTCCTGTCTCTTGGGTATCAAGGCTCTCTTGCTGGTGGTTTACCAATGTCAAATCATAGTTCTGTTTCATCTGTGCATCCTTCAGCTGGGCTAAATTCATCACTTCCATCATCTTCTGGTATTGGTCTTAGCAATAACTTAACATCATCTGGTCCATTGGCAGCCCCTGCCAGGGATAGTAGATATGGAGTTTCACGAACTCCACCTTTATCAGTTGACGAACAGAAGAGAATACAACAATATAATCAGATGATATCTAGCAGAAACATGCCGCAATCTACCATGTCTGTTCCTGGATCTCTTTCAGGAAGTGATCTTGGTGGTGTGCGAATGTTGCCTGGTGGAAATGGTATGGGCATGTTGGGAGTGCCATCATCATCTATGCTTAGTTCTGGAGGCATGCCTTCTTCTAGTATGGTGGGGATTCCAAGCCCTGTAAATATGCATGCTGGAGTTGGTGCTGGACAAGGAAACTCAATGCTGAGACCTCGGGAGACTGTACATATGATGAGGTTAGGCGAGAAGAGACAGAATATAGGGAAAAATTTTCATATTAAAATTATTATGATAATAAACTAG
>Glyma18g36290.1 sequence type=predicted peptide gene model=Glyma18g36290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high NSITFLYPVGTFPADFVWNDNQPLVPVHNSHGIALSQICPNNLNGNGYLEFFTFWLYIIVLFGTITSILTIFEFCPDVLSLGYQGSLAGGLPMSNHSSVSSVHPSAGLNSSLPSSSGIGLSNNLTSSGPLAAPARDSRYGVSRTPPLSVDEQKRIQQYNQMISSRNMPQSTMSVPGSLSGSDLGGVRMLPGGNGMGMLGVPSSSMLSSGGMPSSSMVGIPSPVNMHAGVGAGQGNSMLRPRETVHMMRLGEKRQNIGKNFHIKIIMIIN*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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