Report for Sequence Feature Glyma18g33760
Feature Type: gene_model
Chromosome: Gm18
Start: 39846642
stop: 39849311
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g33760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G24840 AT
Annotation by Michelle Graham. TAIR10: Sec14p-like phosphatidylinositol transfer family protein | chr3:9067301-9070256 FORWARD LENGTH=579
SoyBase E_val: 8.00E-154 ISS
GO:0006810 GO-bp
Annotation by Michelle Graham. GO Biological Process: transport
SoyBase N/A ISS
GO:0005622 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: intracellular
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
KOG1471
KOG
Phosphatidylinositol transfer protein SEC14 and related proteins
JGI ISS
PTHR23324 Panther
SEC14 RELATED PROTEIN
JGI ISS
PTHR23324:SF5 Panther
SEC14 CYTOSOLIC FACTOR-RELATED
JGI ISS
PF00650 PFAM
CRAL/TRIO domain
JGI ISS
PF03765 PFAM
CRAL/TRIO, N-terminus
JGI ISS
UniRef100_B9S518 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Transporter, putative n=1 Tax=Ricinus communis RepID=B9S518_RICCO
SoyBase E_val: 4.00E-156 ISS
UniRef100_I1N215 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1N215_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g33760
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma18g33760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g169300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g33760
Coding sequences of Glyma18g33760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g33760.1 sequence type=CDS gene model=Glyma18g33760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTAGGAGAAGAAGTATTAGCTCAAGAAGATGAGAGGGGTAGATGTTTTGAGCCTGAAACCTCTGAGGATGAGTGGCGGAAGTCTCGAACTAGATCTCTTAGGAGAAAAGCAATAACTGCTTCAACTAGACTCGCTTATAGTCTCAGGAAGCGTAATACACGTGTAGCAAATAGTGACTTTGCTTCAATTTTCATAGAAGATGTCCGTGATGCTAACGAGGAAAAAGCTGTGAATTCATTTCGTCAGGTGCTACTTACAAGAGATCTGCTTCCAGATTCCCATGATGATTATCATGAAATGCTGAGGTTTCTGAAAGCCAGAAAGTTCGACATTGATAAAAAAGTCCAGATGTGGGCAGATATGTTGCATTGGAGGAAGGAATATGGAGTAGATTCTATTTTACAGGAATTTGTATATAAGGAGTATGAAGAGGTACAGTGTTATTATCCTCATGGCTACCATGGTGTAGACAAAGAGGGCCAACCGGTTTATATTGAAAGACTTGGCAAAGTTGAACCCAGCAAGTTGATGAGTGTCACGACAGTTGATCGATTTTTAAAATATCATGTTCAGGGATTTGAGAAAATGTTTAAAGAGAAATTCCCAGCATGTTCTATTGCAGCAAAGAGGCATATAGATAAAACAACAACAATACTTGATGTGCATGGAGTGAATTGGGTTAGCTTTAGCAAAGTTGCACATGATCTTGTTATGCGTATGCAAAAAATTGATGGTGATAACTACCCTGAGACATTAAACCAAATGTTCATTGTTAATGCTGGTAGTGGGAACAAGCATTGCAACAAGTTTCAGAGCAGACTGTTACAGATTATAGACACAAGCCAACTTCCAGATTTCCTCGGCGGCAGTTGTTCGTGCCCAAATGATGGAGGGTGTCTTAGATCTGATAAGGGACCTTGGAATGATCCTGACATTTTGAAA
Predicted protein sequences of Glyma18g33760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g33760.1 sequence type=predicted peptide gene model=Glyma18g33760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
LGEEVLAQEDERGRCFEPETSEDEWRKSRTRSLRRKAITASTRLAYSLRKRNTRVANSDFASIFIEDVRDANEEKAVNSFRQVLLTRDLLPDSHDDYHEMLRFLKARKFDIDKKVQMWADMLHWRKEYGVDSILQEFVYKEYEEVQCYYPHGYHGVDKEGQPVYIERLGKVEPSKLMSVTTVDRFLKYHVQGFEKMFKEKFPACSIAAKRHIDKTTTILDVHGVNWVSFSKVAHDLVMRMQKIDGDNYPETLNQMFIVNAGSGNKHCNKFQSRLLQIIDTSQLPDFLGGSCSCPNDGGCLRSDKGPWNDPDILK
SoyBase
SoyBase transitions to NEW site on 10/1/2024
