Report for Sequence Feature Glyma18g33700
Feature Type: gene_model
Chromosome: Gm18
Start: 39815687
stop: 39817904
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g33700
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G23880 AT
Annotation by Michelle Graham. TAIR10: F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364
SoyBase E_val: 3.00E-27 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF00646 PFAM
F-box domain
JGI ISS
UniRef100_G7IYP6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: F-box/kelch-repeat protein n=1 Tax=Medicago truncatula RepID=G7IYP6_MEDTR
SoyBase E_val: 2.00E-50 ISS
UniRef100_I1N213 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1N213_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g33700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma18g33700 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g160800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g33700
Coding sequences of Glyma18g33700
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g33700.1 sequence type=CDS gene model=Glyma18g33700 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCGATCAGAGAAGAAACCATGGTCGCCACTCCTCTGTGACGAACTCATCGAGGAAATCTTGTCTCGTCTTCCCGTGAAACCTTTGATCCAATTCAAGTGTGTGTGCAAGGGATGGAACTCCCTGATGTCAGATCCCTATTTCATCAAATTGCACCTTAGCAAATCTGCTGCGAAGGACGATTTGGAACACCTTCAACTGATGAAAAATGTCTGCCTCGGATCCATCCCTGAAATCCACATGGAATCGTGTGATGTAAGTTCGTTATTCCATTCCCTACAAATTGAAACGTTCTTGTTCAATTTCGCAAACATGCCAGGTTACCATCTGGTCGGTTCATGTAATGGGTTGCACTGTGGGGTTAGCGAAATACCAGAAGGATACCATGTTTGTTTCTGGAACAAGGCGACAAGGGTGATATCCAGAGAATCGCCAACGCTGTCTTTTTCCCCAGGCATTGGTCGTAGAACAATGTTTGGGTTTGGCTATGATCCGTCAAGTGACAAATACAAGGTTGTCGCAATTGCATTGACTATGCTTTCACTTGACGTATCTGAAAAGACTGAGATGAAAGTTTATGGCGCGGGTGACAGTAGTTGGAGAAACCTTAAAGGTTTTCCTGTTCTTTGGACTTTACCTAAAGTTGGTGGAGTGTATCTGACTGGAACCCTTAATTGGGTTGTTATTAAGGGAAAAGAAACCATTCATTCTGAAATCGTAATTATTTCTGTTGACCTGGAGAAGGAGACTTGCAGATCACTGTTTCTTCCCGACGATTTTTGCTGTTTTGATACAAATATTGGAGTTTTTAGAGACTCGTTGTGCGTTTGGCAAGATAGCAACACCCATCTTGGCTTGTGGCAGATGAAGAAGTTTGGAGATGACAAGTCTTGGATTCAATTAATAAATTTTAGTTATTTACATCTTAAAATTCGTCCTAATGAAGAAAAATCGATGATTTTACCATTGTGCATGTCTAACAATGGAGACTTCTTCATGCTAAAATTCACTAGAAATGCTGATGATGAATACCAAACAATTCTGTATAACCAGGGGGATGGTACGAGGACAGAACAAGAATGGTACATTAAACTGTAG
Predicted protein sequences of Glyma18g33700
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g33700.1 sequence type=predicted peptide gene model=Glyma18g33700 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRSEKKPWSPLLCDELIEEILSRLPVKPLIQFKCVCKGWNSLMSDPYFIKLHLSKSAAKDDLEHLQLMKNVCLGSIPEIHMESCDVSSLFHSLQIETFLFNFANMPGYHLVGSCNGLHCGVSEIPEGYHVCFWNKATRVISRESPTLSFSPGIGRRTMFGFGYDPSSDKYKVVAIALTMLSLDVSEKTEMKVYGAGDSSWRNLKGFPVLWTLPKVGGVYLTGTLNWVVIKGKETIHSEIVIISVDLEKETCRSLFLPDDFCCFDTNIGVFRDSLCVWQDSNTHLGLWQMKKFGDDKSWIQLINFSYLHLKIRPNEEKSMILPLCMSNNGDFFMLKFTRNADDEYQTILYNQGDGTRTEQEWYIKL*