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Report for Sequence Feature Glyma18g32670

Feature Type:gene_model
Chromosome:Gm18
Start:38089537
stop:38091149
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma18g32670
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G33700AT Annotation by Michelle Graham. TAIR10: CBS domain-containing protein with a domain of unknown function (DUF21) | chr4:16176547-16179188 REVERSE LENGTH=424 SoyBaseE_val: 1.00E-81ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PTHR12064Panther ANCIENT CONSERVED DOMAIN PROTEIN-RELATED JGI ISS
PTHR12064:SF2Panther CYCLIN-RELATED JGI ISS
PF00571PFAM CBS domain JGI ISS
UniRef100_G7IFC4UniRef Annotation by Michelle Graham. Most informative UniRef hit: CBS domain containing protein n=1 Tax=Medicago truncatula RepID=G7IFC4_MEDTR SoyBaseE_val: 7.00E-83ISS
UniRef100_I1M2I3UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M2I3_SOYBN SoyBaseE_val: 9.00E-99ISS

Expression Patterns of Glyma18g32670
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g32670 not represented in the dataset
Glyma18g32670 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g32670 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma18g32670
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma18g32670
>Glyma18g32670.1   sequence type=CDS   gene model=Glyma18g32670   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GCTGGAAAAGGTGGAGAACTGACACATGATGAAACCACAATCATTGCTGGAGCGCTTGAACTCTCTGAGAAGACATCCAGTGATGCCATGACTCCCATAACTGATATATTTTCCATTGATATTAATGCAAAGCTTGATAGGGATTTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTTCCTGTCTATTATGAGCAGCCTACAAATATTATTGGACTTGTTCTGGTCAAGAATTTATTGACAATTGACCCAGAAGAAGAAATACCCGTGAAAAATGTGACCATCCAAAGAATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGATATTTTGAATGAGTTCCAAAAGAGCCATAGCCACATGGCTGTTGTTGTCAGACATTGTGAGAAGACAAGGCAACAGTCTTCCAACAATAATGCCGATGTGAGAGATGTAAAGGTAGATATTGATGGTGGGCTAAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCAACTTACTAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAG
Predicted protein sequences of Glyma18g32670
>Glyma18g32670.1   sequence type=predicted peptide   gene model=Glyma18g32670   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGKGGELTHDETTIIAGALELSEKTSSDAMTPITDIFSIDINAKLDRDLMNLILEKGHSRVPVYYEQPTNIIGLVLVKNLLTIDPEEEIPVKNVTIQRIPRVPETLPLYDILNEFQKSHSHMAVVVRHCEKTRQQSSNNNADVRDVKVDIDGGLRRDAESKEQKLAEQWAAKHLQLTKFLEQVGCRSRLTEPNGR*






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